Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1386 ATGCCGACGCCCGTGGCAGCCGCGCGCCAATGCCTAACTCCCGACGCCGCGCGCGCCCTCGACGAGGCCGTCTCCGTCGCCCGCCGCCGGGGCCACGCCCAAACCACGTCGCTCCACGCCGTCTCCGCCCTCCTCTCCCTCCCATCCTCACCCCTCCTCCGCGACGCCTGCTCCCGCGCCAGAAACTGCGCGTATTCCCCACGCCTCCAGTTCAAGGCCCTGGACCTCTGCCTCTCCGTCTCCCTCGACCGCGCCCCCTCCTCCCACAACCACTCCTCCGCCGACCACGACCCTCCCGTCTCAAACTCCCTCATGGCCGCCATAAAACGCTCTCAGGCCAACCAGCGGCGCCACCCTGACAACTTCCACTTCTCCCAAGGGTCTTACTCACCATTAGATCGGGGTTGCCAGAAGCAACAGCAACAGCAACAGCCGTTTTCTGTTTCCTCTGTCAAAGTAGAGCTTCAGCATTTGATCTTGTCAATCCTAGACGACCCGGTTGTCAGTCGCGTTTTCGCCGAAGCCGGTTTCCGGAGCTCCGATATCAAACTCGCCATCCTCCGCCCTCTCCGCCCCCGCGGCTCGCCGATTTTCCTCTGCAATTTATCCGAGTCGCCGCGCCGCTTCCCGTTCTTCTTCGGCTGTGGTGACGAGGACGGCGGCGGAGAGAATTTCCGGCGAATCGGGGAGGTTCTGGTGCGGAGCCGGGGGAAGAATCCGCTGCTTCTCGGCGCGTGCGCGAACGACGCTCTGCGTGGCTTTGCCGAGGCGGTGGAGAAACGGAGAGAAGGGGCTTTGCCGGTGGAGTTGCTGGGGCTGCGCGTGGTTTGCATTGCGGAGGAGGTGGCGGGTGGGGATGCGGAGGTGGTGGGGAGGCGCGTGAGGGAGATTGGGAATTTGGCGGAGCAGTGTGTGGGGCCCGGTGTTGTGGTGAGCTTCGGGGACTTGAAGGGTTTTGTGAGCGATGAAGAAGGTGAGGGTCTGAAGAGTGTGGTTGGAGAATTAGCGAAGTTGTTGCAGGTTCATTATGATAAGTTTTGGTTGATTGGTGCTGCGGCTACTTACGAGAGTTACTTGAAATTCGTGGGGAAGTTTCCTTCTATAGAGAAAGACTGGGATTTGCAGCTTCTGCCTATTACCTCTGTTAAGCCTCCTTCTGAATCCTATCACCGTCCCAGGTCCAGCTTAATGGATTCATTTGTACCGTTTGGTGGCTTTTTTTCGTCACAGTCTGATTTGAAAGCTCCACTGAATAGCTCGTTTTATTGTGTTCCCCACTGTCACCAGTGTGGGGAAAGGTGTGAACATGAAGTCCTTGCTGCTTCCAAGGAAAGGTTTTGTGCTTCTTCAGCTGCTGATCCGCATCAATCTAGCTTGCCTCCTTGGTTGCAGATTGCAGAATTTGGCTCAACAAAAGGGTTGAATGTTAAGACCAAAGATAATGGTGTTTTGCTCGATAGTAGTGAATCTGGGCCACTCCATAAGAACTTAGACAAGTTATCCCAGCATCTGCTCCATCGAGATGCAAATACTTTTCCGACTGTTGTGGGGTTTCATTGTGGTGCTGAAAAGAAGAAGGAAGACGTTGACAATTGCCGCAGCAAATCACCTAGTGAATACATCAATCTCAACTCCCATGTACCTGTTGGCATGCAAATGATGCCTACATCACAATCAAGTAGTCCTTTTCCTGCAGTTTTCAAGGCAAAGCAGGAGAAATATAATTCAAAACTTGCTGAGATGTTCCAGAAAGTGGAAGATCACGATTCAGGTGACCGAAGATCATGCAACATGTCCAATTCAAGTGTATGTGATGGCAGTCAAATGTCTCCCACATCTGTAACTTCTGTAACCACAGATCTTGGGTTAGGAATATGCTCTTCTCCTACCTGCAATAAATTGAAGAAACCTGCTGTTCAATATACAATGGAGCCTCCAAAGGAAATCCCAAGTCGATTTTCTCCAAACAATAATGTGGCTGATGGGAATATGTTGAAGCATCCATCACAGTCTTCATCCTGCTTAAGTTTTGACTATTGTGGACAAGTTGATGCAAAAAATCCCAAAATTCTTTTTGAAGCTCTTTCCAAGGAGGTATGCTGGCAAGATGAAGCTTTACGGGCTATCGTCAAAACAATTGTTTGCAGCCCTACAAAGAGGGTTAAACACCGTGGACCAAATCAGCCTGGGGACATCTGGATGAATTTTGTTGGACATGATAGACTTGGTAAAAAGAAAATTGCTGTTTCTCTAGCTGAGCTATTATACGGTAGCCGGGAGAGCTTTATTTTTGTGGATCTAAGTTCTGAAGAAATGAAAGGATGCAATGTGAAATTCAGAGGGAAGACTACCCTTGATTTTATTGTAGGGGAGTGTTGCAAGAAACCCTTGTCCGTGGTTTTCCTTGAAAATGTAGACAAGGCAGATATTCTAGCTCAAAATAGTTTGTGTCAAGCCATCAAGACAGGAAAAATTACAGACTCGCATGGACGAGAAGTTAGTGTAAACAATACAATGTTTGTTTTTTCTTTCTCAGATAACCAAAACAGTTCGATGCCAAGAGGGGAACCTTCTAACTATTCTGAGGAGAGAATACTGAGGGCAAAAGGGGGAGGTATCAAGATAAAAGTTGAACATGTGATTGGAGACATCAGAAGCCAAAGCATCAGTCTAACAAACAATTCAATAGATGCCATTCCTAATCTAAATTTCCTAAGCAAACGAAAGTTGATTGGTGACAATGAATTTCATGATCCGCATTTACTCTCTGATACAGCTAAAAGGGCACATACAACATCAAATTGGCTGTTAGATTTGAATCTCCCAGCAGAAGAGAATGAACAGAAACAAACAAATGATGGAAACTCTGATCATGTTGTCTTGACTGAGAATCAAAAGCTTTGGTTGCAAGATTTGTGTGATCTGGTTGATGAAACAGTTGTTTTTAAACCTTATGATTTTGATGCTCTTGCAGATAGAGTGTTGAAAGTGATCAGAAGTAACTTCAACAAAATTCTCGGATCCAAGTGTGCATTGCAGATCCAGACAGAAGTCATGGACCAATTTCTTGCAGCTCAATATGTCTCAGACCGGGATACGGAGGTGGAGAACTGGGTGGAGGAAGTTCTATGTGAAGGATTTACAGAAATACAGAGAAGGTACAACCTCACTGCTAGTTCTATTGTAAAACTTGCTACGTGTCCTGAGCAAGCTGCTGGTGTACACCTTCCCTCAAGGATAATTTTAGATTGA 3252 0.4806 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLPSSPLLRDACSRARNCAYSPRLQFKALDLCLSVSLDRAPSSHNHSSADHDPPVSNSLMAAIKRSQANQRRHPDNFHFSQGSYSPLDRGCQKQQQQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGSPIFLCNLSESPRRFPFFFGCGDEDGGGENFRRIGEVLVRSRGKNPLLLGACANDALRGFAEAVEKRREGALPVELLGLRVVCIAEEVAGGDAEVVGRRVREIGNLAEQCVGPGVVVSFGDLKGFVSDEEGEGLKSVVGELAKLLQVHYDKFWLIGAAATYESYLKFVGKFPSIEKDWDLQLLPITSVKPPSESYHRPRSSLMDSFVPFGGFFSSQSDLKAPLNSSFYCVPHCHQCGERCEHEVLAASKERFCASSAADPHQSSLPPWLQIAEFGSTKGLNVKTKDNGVLLDSSESGPLHKNLDKLSQHLLHRDANTFPTVVGFHCGAEKKKEDVDNCRSKSPSEYINLNSHVPVGMQMMPTSQSSSPFPAVFKAKQEKYNSKLAEMFQKVEDHDSGDRRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLGICSSPTCNKLKKPAVQYTMEPPKEIPSRFSPNNNVADGNMLKHPSQSSSCLSFDYCGQVDAKNPKILFEALSKEVCWQDEALRAIVKTIVCSPTKRVKHRGPNQPGDIWMNFVGHDRLGKKKIAVSLAELLYGSRESFIFVDLSSEEMKGCNVKFRGKTTLDFIVGECCKKPLSVVFLENVDKADILAQNSLCQAIKTGKITDSHGREVSVNNTMFVFSFSDNQNSSMPRGEPSNYSEERILRAKGGGIKIKVEHVIGDIRSQSISLTNNSIDAIPNLNFLSKRKLIGDNEFHDPHLLSDTAKRAHTTSNWLLDLNLPAEENEQKQTNDGNSDHVVLTENQKLWLQDLCDLVDETVVFKPYDFDALADRVLKVIRSNFNKILGSKCALQIQTEVMDQFLAAQYVSDRDTEVENWVEEVLCEGFTEIQRRYNLTASSIVKLATCPEQAAGVHLPSRIILD* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1386 1083 MobiDBLite consensus disorder prediction 586 609 - -
Gso13g1386 1083 Pfam Clp amino terminal domain, pathogenicity island component 153 187 IPR004176 -
Gso13g1386 1083 ProSiteProfiles Clp repeat (R) domain profile. 8 195 IPR004176 -
Gso13g1386 1083 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1082 - -
Gso13g1386 1083 PANTHER PROTEIN SMAX1-LIKE 8 1 1082 - -
Gso13g1386 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 691 1005 IPR027417 -
Gso13g1386 1083 Gene3D - 671 883 IPR027417 -
Gso13g1386 1083 Gene3D - 10 189 IPR036628 -
Gso13g1386 1083 MobiDBLite consensus disorder prediction 595 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1386 Gso-Chr13 29380216 29385430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1386 - - gmx:100800606 2122.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0234 18 2022740 2028362 Gso13g1386 13 29380216 29385430 GST