Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1747 ATGCCGACGCCGGTAAGCACCGCGAGGCAATGCCTGACGGACGAGGCGGCGCGTACCCTCGACGACGCCGTCTCCGTCGCCCGGCGCCGCAGCCACGCCCAAACCACCTCCCTTCACGCCGTCTCCGCCCTCCTCTCCCTCCCCTCCGCCTCACTCCGCGACGCCTGCTCCAGCTGCCGCAGCTGCTCCTACTCCCCCCGCCTCCAGTTTCGCGCCCTCGAACTCTCCGTCGGCGTCTCCCTCGACCGCCTCCCCACCACCAAATCCGGCGGCGCCGATGAGGGTCCTCCCGTCTCAAACTCCCTGATGGCTGCCATCAAGCGCTCCCAGGCCAACCAGCGTCGCCACCCGGACAGCTTCCACCTTATGCAAATGATGCAGCATCAAACTCAAACGACGTCGTTGCTCAAAGTCGAACTCAAACACTTCATTCTCTCTATCCTCGACGACCCTATCGTGAGTCGCGTCTTCGCCGAAGCCGGTTTCCGAAGCTACGACATCAAACTCGCCCTCCTCCACCCCCCTCCTCCCCCTCCCTCCAGAATCTTCTCTCGCCTCACCCCACCGCTTTTCCTCTGCAACCTTGAACCTATCCAAACCGGTTCAGTCCAACCCATTTCGTGCCTCGACGATAATTGCCGCAGAATCGTGGAAGTAATCACCAGGAAGACCAAAAGGAACCCTCTTTTGATGGGGGTGTACGCCAAAACCGCTCTCAGGAGCTTCGTTGAAGTTGTGAAGAAGAACGGTAAAGGTGGAGTCTTGCCTTGTGAGCTTAACGGTTTGAGCGTGGTTTCGGTGGAAAAAGAGATTGGGGAGTTTCTGAGGGAAGGTGGGAGGGGTGAGATGATTTTTGAGCATGTGGGTCATTTGGTGGAGCATGGTGGTGGTGGGGTTGTGGTGTGTTACGGGGAGATTGAGGTTTTTGTTGGGGGGTATAAGGAAGAAGGTAGTGTTGGGTTTGTGGTTTCGCAGTTGACGAGGTTGTTGGGGGTTCATGGAGGAGGGAAGGTGTGGTTGTTGGGGGTGGCGGGAACCTCTGAGGACTATTCTAAGTTCCTGAGGTTGTTTCCTACTGTGGACAAGGATTGGGATCTGCATCTTCTGACCATGACCTCTGCCACCCCTTCCATTGAAAAACTCTACCCTAAGTCCAGCTTGATGGGGTCCTTTGTGCCATTTGGTGGGTTCTTTTCTACACCTTCTGAGTTCAAAAATCCCGTAAGCTGTACGAATGCATCATCATCATCTTTACTAACTCGATGTGACACATGCAATGAAAGTTGTGAGCAAGAAGTTGCTGATATTTTGAAGACTAATGAAGAAAATACAAGTTTGAATATAAAGATCTTCGGATTGCAAAGGAGATGGAGTGATATTTGTCAACGTCTTCATCAAAACCGATCATTACCTGAATTTGATATCACCAAAACAAGGTTCCAAGCTCCTTCCCATGAGGGGTTTCAATTTGGTCCAGGAAGTAGCAGCAGAGGTCCACTCCATAGTGAAATCCAATATTCTGATCATATTTCCTACATGTCTAAAGAGTCACAAAGTGCATTTCCATTTAAACAGATATTACCAGTTTCGGTACCTTTTGACACTGTTAGTATCACTGATGAAGCAGACCAAATACCAAAAGTTTCAAAGACTGATATGCATGGTACTTGGGTTTCTCCTTCCCCTAAGGCCAATATAAGCCTTCTTGATCCCACAACATTTTCATCTGTGACTCCTGTGACCACAGATTTGGGATTGGGAACAATTTACACATCAGCTGCTCATGAGCCAGACACACCAAAACTAAGTGATCATAAGAAGCCTCTCCATCACTTGTCAGATTCCCTTTCAACCGATTTTGATGCTATGAATGAGAATACTTCACACCAAATTGCAAGATCTTCTTCCTGCTCTGGTCCAAATCTAGAAGGGAGATTTGAAACTGTAGATTTCAAGTCACTTTACCATCTTCTCACTGAAAAGGTTGGCTGGCAGGATGAGGCCATATACGCTATCAATCGAACCGTGTCTCGTTGTAGATCCGGTGCTGGAAAGCTTAGTAGTGATTCACATGTTAGAGCAGACATATGGCTTGCTTTTCTTGGACCAGATAGGCTTGGAAAAAGAAAAATTGCATCAGCACTTGCTGAGATTTTATTTGGAAACAAACAAAGCCTAATCACTGTGGATTTGAGCTCCCAAGACCGGTGTTACCCATCATACTCTATTTTTGAATTCCAAAATTCATATTGTCATGATGTGCTTATGAGGAAGACAGTGTTGGACTATATTGCTGGGGAGTTGAGTAAAAAGCCGCACTCGGTCGTCTTTCTTGAAAATGTGGATCAAGCTGATTTCCTGGTGCAGAATAGTTTGTTCCATGCAATAAAAACAGGTAAATTCCCATACTCACACGGAAGGGAAATCAGCATCAACAATGCAATGTTTATTGTAACCTCTAGTGTGTTTAAAAGTAGTGGCTCTTTTAACTTGGAGGAGGATCCTAAAATGTTTCCAGAGGCAAGAATCCTAGAAGCTAAAAGATGTCAAATGCAATTATCACTTGGACATGCTTCTGAGGGTGCCAAAAGGAGTGGTTGCACAAATGTGAAGGTTGCAGAGAGAAAAGGGAAATCCAAAACAACATTTCTGAGTAAAAGAAAGCTAATAGAAAGTGGTGATTTAAAAGATAAAGCACCATGCAAGACACTGAAACCAGTCAGGGAGGCATCGAGGTCCTATCTCGATCTTAATATGCCTCTTGAGGAGGTTGAAGAGGGCAACAATTACAATGATGATGAAAGTGAATCAATAGTTGAAAACTCTGGAGCCTGGTTAAATGATTTGTGTGATCAAGTTGATGAAAAAGTTGTTTTTAAGCCTTTCAACTTTGATTCTATTGCTGAGCAAGTAATTAAAAGCATTGACACACAATTTCAAAAGATGTTAGGATCAGAGTTTATACTTGAAATTGAGTATGAGGTCATGACACAGATACTTGCAGCTGCTTGGTTATCAGACAAGAAAAAATCTTTGGAAGATTGGGTTGAACATGTTCTTGGAAGAAGCTTTGGTGAAGCTCATCAAAAGTACCACTTTGCACCTGAATTTGTGATGAAACTGGTTAATTGTGAAAGATTTTTTTTGGAAGAACAATCTCCTGGAGTATGCCTTCCAGCTAGAATTAACTTGAACTGA 3198 0.4581 MPTPVSTARQCLTDEAARTLDDAVSVARRRSHAQTTSLHAVSALLSLPSASLRDACSSCRSCSYSPRLQFRALELSVGVSLDRLPTTKSGGADEGPPVSNSLMAAIKRSQANQRRHPDSFHLMQMMQHQTQTTSLLKVELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLHPPPPPPSRIFSRLTPPLFLCNLEPIQTGSVQPISCLDDNCRRIVEVITRKTKRNPLLMGVYAKTALRSFVEVVKKNGKGGVLPCELNGLSVVSVEKEIGEFLREGGRGEMIFEHVGHLVEHGGGGVVVCYGEIEVFVGGYKEEGSVGFVVSQLTRLLGVHGGGKVWLLGVAGTSEDYSKFLRLFPTVDKDWDLHLLTMTSATPSIEKLYPKSSLMGSFVPFGGFFSTPSEFKNPVSCTNASSSSLLTRCDTCNESCEQEVADILKTNEENTSLNIKIFGLQRRWSDICQRLHQNRSLPEFDITKTRFQAPSHEGFQFGPGSSSRGPLHSEIQYSDHISYMSKESQSAFPFKQILPVSVPFDTVSITDEADQIPKVSKTDMHGTWVSPSPKANISLLDPTTFSSVTPVTTDLGLGTIYTSAAHEPDTPKLSDHKKPLHHLSDSLSTDFDAMNENTSHQIARSSSCSGPNLEGRFETVDFKSLYHLLTEKVGWQDEAIYAINRTVSRCRSGAGKLSSDSHVRADIWLAFLGPDRLGKRKIASALAEILFGNKQSLITVDLSSQDRCYPSYSIFEFQNSYCHDVLMRKTVLDYIAGELSKKPHSVVFLENVDQADFLVQNSLFHAIKTGKFPYSHGREISINNAMFIVTSSVFKSSGSFNLEEDPKMFPEARILEAKRCQMQLSLGHASEGAKRSGCTNVKVAERKGKSKTTFLSKRKLIESGDLKDKAPCKTLKPVREASRSYLDLNMPLEEVEEGNNYNDDESESIVENSGAWLNDLCDQVDEKVVFKPFNFDSIAEQVIKSIDTQFQKMLGSEFILEIEYEVMTQILAAAWLSDKKKSLEDWVEHVLGRSFGEAHQKYHFAPEFVMKLVNCERFFLEEQSPGVCLPARINLN* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1747 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 822 IPR027417 -
Gso11g1747 1065 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 435 1065 - -
Gso11g1747 1065 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 438 - -
Gso11g1747 1065 Gene3D - 628 857 IPR027417 -
Gso11g1747 1065 ProSiteProfiles Clp repeat (R) domain profile. 8 177 IPR004176 -
Gso11g1747 1065 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 435 1065 - -
Gso11g1747 1065 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 438 - -
Gso11g1747 1065 Gene3D - 10 173 IPR036628 -
Gso11g1747 1065 SUPERFAMILY Double Clp-N motif 12 120 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1747 Gso-Chr11 24687890 24694303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1747 - - gmx:100805591 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1747 11 24687890 24694303 Gso11g1747 11 24687890 24694303 ECH
Gso11g1747 11 24687890 24694303 Gso18g0234 18 2022740 2028362 ECH