Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0206 ATGGAGCCTGCCAAAACCATTCACAACAATGTCAAATACTCCCCCATCTTCTTAGCCATCTTTGTTCTGATCTTAGCTTCAGCATTGTCTTCAGCAAATGCCAAAATTCACGAGCACGAGTTTGTTGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACCCACAACAGCATCACCGTGAATGGACAATACCCGGGCCCAACGTTGGAAATCAACAATGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGTTACAATGTGACCATTCATTGGCACGGTGTTAGGCAAATGAGAACAGGGTGGGCAGATGGACCAGAATTTGTGACTCAGTGCCCGATTCGTCCAGGAGGAAGTTACACCTACCGTTTTACCGTTCAAGGACAAGAAGGCACACTTTGGTGGCACGCTCATAGCTCATGGTTAAGGGCCACCGTTTACGGTGCTTTAATCATTCGTCCTAGGGAAGGAGAACCCTACCCTTTCCCCAAGCCTAAGCACGAGACACCCATTCTTCTTGGGGAATGGTGGGACGCAAACCCTATTGATGTTGTGAGGCAGGCCACACGAACTGGGGGAGCCCCAAACGTGTCTGATGCATACACTATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCCAGCAAAGACACCACCATTGTCCCAATACATGCCGGCGAGACCAACCTTCTTCGTGTCATCAATGCTGCACTCAATCAACCTCTCTTCTTCACCGTCGCAAACCACAAACTCACAGTGGTTGGTGCCGACGCCTCCTACCTCAAACCCTTCACCACCAAAGTCCTCATGCTGGGCCCCGGGCAAACCACCGACGTCTTAATCACCGGCGACCAGCCACCTTCCCGCTACTACATGGCGGCGCGTGCGTACCAATCCGCCCAAAACGCTGCCTTCGACAACACCACCACAACCGCCATACTCGAATACAAATCACCGAATCACCACAATAAGCATTCTCACCATCATGCCAAAGGAGTAAAGAACAAAACCAAACCTATAATGCCTCCACTCCCTGCTTACAACGACACAAACGCAGTCACTGCCTTCAGCAAAAGCTTCAGAAGCCCTAGAAAAGTTGAAGTACCCACTGAAATTGACCAGAGCCTCTTCTTCACTGTGGGTTTAGGTATCAAGAAGTGCCCCAAAAACTTCGGACCAAAGAGGTGTCAGGGACCCATTAATGGGACGAGGTTCACTGCGAGCATGAACAACGTGTCTTTCGTTCTCCCGAACAACGTGTCCATCTTGCAGGCTCACCACCTCGGAATCCCTGGAGTGTTCACCACTGATTTTCCGGGGAAGCCGCCGGTGAAGTTTGATTACACCGGCAATGTGAGCCGTTCGCTGTGGCAACCTGTTCCCGGGACAAAGGCACACAAGTTGAAGTTTGGGTCGAGGGTGCAGATTGTGTTGCAGGATACTAGCATTGTCACTCCTGAGAACCACCCTATCCATCTTCATGGGTACGATTTCTACATTGTTGCAGAGGGTTTCGGGAACTTCGACCCAAAGAAAGATACGGCGAAATTCAACCTTGTTGATCCACCTTTGAGAAACACAGTGGCTGTGCCTGTAAATGGATGGGCAGTTATTCGATTTGTGGCTGATAACCCAGGTGCATGGCTTTTGCATTGTCACTTGGACGTTCACATTGGATGGGGTTTGGCTACGGTGTTGTTGGTGGAGAATGGAGTTGGGAAGTTGCAATCCATAGAGCCTCCTCCTGTGGATCTTCCTCTTTGTTAG 1770 0.4994 MEPAKTIHNNVKYSPIFLAIFVLILASALSSANAKIHEHEFVVEATPVKRLCKTHNSITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPKHETPILLGEWWDANPIDVVRQATRTGGAPNVSDAYTINGQPGDLYKCSSKDTTIVPIHAGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLITGDQPPSRYYMAARAYQSAQNAAFDNTTTTAILEYKSPNHHNKHSHHHAKGVKNKTKPIMPPLPAYNDTNAVTAFSKSFRSPRKVEVPTEIDQSLFFTVGLGIKKCPKNFGPKRCQGPINGTRFTASMNNVSFVLPNNVSILQAHHLGIPGVFTTDFPGKPPVKFDYTGNVSRSLWQPVPGTKAHKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDTAKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLLHCHLDVHIGWGLATVLLVENGVGKLQSIEPPPVDLPLC* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0206 589 PANTHER LACCASE 12 589 - -
Gso18g0206 589 Pfam Multicopper oxidase 169 318 IPR001117 -
Gso18g0206 589 SUPERFAMILY Cupredoxins 369 589 IPR008972 -
Gso18g0206 589 CDD CuRO_1_LCC_plant 39 155 IPR034288 GO:0005507
Gso18g0206 589 PANTHER MULTI-COPPER OXIDASE 12 589 IPR045087 -
Gso18g0206 589 Gene3D - 167 366 IPR008972 -
Gso18g0206 589 SUPERFAMILY Cupredoxins 163 364 IPR008972 -
Gso18g0206 589 CDD CuRO_2_LCC_plant 171 317 IPR034285 -
Gso18g0206 589 Gene3D - 396 589 IPR008972 -
Gso18g0206 589 SUPERFAMILY Cupredoxins 33 182 IPR008972 -
Gso18g0206 589 TIGRFAM laccase: laccase 34 589 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gso18g0206 589 Pfam Multicopper oxidase 43 157 IPR011707 GO:0005507
Gso18g0206 589 ProSitePatterns Multicopper oxidases signature 2. 552 563 IPR002355 GO:0005507
Gso18g0206 589 Gene3D - 38 166 IPR008972 -
Gso18g0206 589 CDD CuRO_3_LCC_plant 434 572 IPR034289 GO:0005507
Gso18g0206 589 Pfam Multicopper oxidase 439 571 IPR011706 GO:0005507|GO:0016491
Gso18g0206 589 ProSitePatterns Multicopper oxidases signature 1. 547 567 IPR033138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0206 Gso-Chr18 1772205 1777149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0206 K05909 - gmx:547704 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0206 18 1772205 1777149 Gso18g0206 18 1772205 1777149 ECH
Gso18g0206 18 1772205 1777149 Gso13g1412 13 29636973 29641667 GST
Gso18g0206 18 1772205 1777149 Gso14g0473 14 4477954 4482019 PCT
Gso14g0473 14 4477954 4482019 Gso18g0206 18 1772205 1777149 PCT