Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0490 ATGCGCTCAGGAGTTTGTACATTACAGCAGACCCTCACAGCTGAGGCTGCTTCAGTGTTGAAGCACTCTCTGGGGTTGGCTCGGAGGAGGGGCCATGCACAGGTCACTCCACTGCATGTGGCTGCCACTTTGCTAAGCTTAAGAGGAAGTTCCTTGAGAAGGGCTTGTCTGAAGTCATCTCAAGCTTCTCATCATCCTCTTCAATGCAGGGCTCTTGAGTTGTGCTTCAATGTTGCCCTCAACAGGCTCCCAACAACACCTTCTCCTTTGATCCACACTCAGCCTTCTCTCTCCAATGCTCTCATTGCTGCATTGAAGAGAGCTCAGGCTCACCAGAGAAGGGGATGCATTGAGCAACAGCAACAACAGCCTCTTCTCACCATCAAGGTTGAGCTTGAACACCTCATCATATCAATCCTTGATGACCCTAGTGTTAGCAGGGTCATGAGAGAGGCTGGTTTCTCCAGCACTGCTGTTAAGAACCACATAGAGGACTCTAATTCACCTCAATATTCTGTTTTCCAGTGTTACAATAGCTCGGGTGGTGTGTTCTCTTCTCCTTGTTCACCTTCTGCCAGTGAGAACAACAACCATAGGGAAACAGCCACCAACAACAACCCTACCAATTTCAGGCACACTACTCGTCATTTCTTAACTTCTTACGCTTCTGAGTTCCACCCTTCACTTGTCTTTTCTCCACCAAAGAATGCACCAGTGTGTTCCATCACTGGTGCAGCTTCTTCTTCTAGTAAGGATGATGATGTCAGGCTTGTTCTGGATATCCTCTTGAGGAAGAAGAAAAAGAACACCGTGATTGTTGGTGACTCACTGTCATTAACTGAAGGCCTTGTGGGAGAGATAATGGGAAGGCTTGAAAGGTCGGAAGTGCCTGATGAGTTAAAGTCAATTCATTTTATCAAATTCCAAATTTCACATGTTTCTTTGAGTTGCATGAAGAGAGATGAAGTTGAAATGAAACTCTTGGAGCTGGAAAGAAAGGTGAATTCCATTGCTTCAGGAGGAGGGGGTGGCATTTTTTATATTGGAGACCTGAAGTGGACAGTGGAGGAGGCAAGTTTAAGTGGAAAAGAGGAAGGGTCCCCAAATGGAGAAGTTTCTGGTTATAATCCTGTTGATCATTTAGTTTCAGAAATAGGAAAGTTATTCTGTGACTGTGGAACCTCAAATAATGCTAAGGTGTGGCTCATGGCCACTGCTAGCTATCAAACATACATGAGGTGTCAAATGAGGCAACCCCCTCTTGAGAAGCAATGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTGGGCTTGAGTCTTCATGCTCCCAGTGTCCTTGATTCAAAGATGACCATCTCGCATAACCAATCTCAAGTGCTGGAAACAAAGCCCTTTGGTAATATGGAGCAGGAGGATAAACTCAATTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCCCAATTTATCAGGCCAGACCAAAAGAAAAGGTTGCCTTTCTGGCTTCAGTCTCATATCACAGAAGACCATAAGAAGGATGAATTAGTCCAATTGAAAAGAAAATGGAATAGACTATGCCACTGTCTCCACCAAAGCAAACAGCCTCAGAACCAATGGAACTGGAACCACAACAGTTATAATTCACCAAGCTCCATATCCTTTGCCAGCAATGCCACACATGGCTCCACTTCCAAACTCGTCCCTCGATTCCGACGCCAACAATCATGCATCATTGAATTCAATTTCGGCAAGAAAAGAGAAGCAACAGAGCCAGTCTTGGATTCCCTTGAGAGCATGGAAGGTAAAGAAGTAAAGACTACTCTTGCTCTTGGCAATGGAGGTTCAGGTGAGTCGGCGGTGGGGGATATAACTGATACAACACTGCAACGAGCTCATATTTGTAAACTATTGCAGGAGAATGTGCCATGGCAGTCTGAAACTTTTCCTTCAATAGCAGAAGCCTTGATTGATTCCAAATCAGCAAAGGAAAGTAACAACATTACTTGGTTACTTATGCAAGGCAATGACACCATTGGGAAAAGAAGGTTGGCACTTGCAATTGCAGAATCAGTTTTTGGCTCAACTAATCTGCTCCTTCAATTTGACATGCTAAAGAGAGAGACATCAATAGCCCCATTTTCTGAAATGCTGGAAGGAGCACTGAAAACACATCACCAGCTTGTGATGCTAATAGAAAATGTTGACTTTGCTGATGCCCAGTTCAAGAAATTCCTCTGTGATGGATTCGAAACAGGAAACTTTGGAAATTTCACTGAAGAGAACTCAAGCCAAGTAATATTCATATTGACAAATGGTGGAAGTGGATCCACTAACATTGAGCAGCAGAATGAGGACTCGGTTATGAGGTTGTTGTGGCAAGTCAGTGAAACCAAGCCTAACTTGGAGACGCCATCTGTCACAACCACGATCGCGGAGCCATGTTTTGGCCACAAAAGAAGAGCTGAACTTGATATGTTTTCTAACACCAACAGTTTTCAAGGGAGCAAGAAGAAAGAGTTTTCAAGACAAACAAGCTTTAACACTCTTGATCTGAACATGAAAGCTGATGAAGGGGATAAAGCAGGAGAAAGTAGCCCCATTTCAAGTGATCAGACCGGAGAAACTATAGCTGATCCACTGAACCAAAACGGATTTCTTGACTCAATTGTGAACCGGTTTGAGTTCAACACAAATCCAGTTAAGGACAGAGAGATGGCAGAGTTGTTTTTGTGTAAGTTCAAAGAGTCTTTTGAAGAGGTTTATGGGAAGAAATGTTTGGAGAATCTAAGTGTAGATGAGAGGGTGATTGAGGATGTGGGTGTTGGGTGTGGTTATTTTACCAACAGCTTGTTTGAGAAATGGCTGAAAGACGTTTTTCAAAGCAGTTTAGAAACGGTTAACTTTGGAGGGAAGGAGGGTATACTTTTTAGACTTTCTTGGGGTGGTAAAGGAGATAGAAAATCGGATAGTGGGTTCATGAGTTCTTCTCTGCCCAAGAGTATCCAAGTTAATTACTTCATAGAGTGA 3033 0.4365 MRSGVCTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSSQASHHPLQCRALELCFNVALNRLPTTPSPLIHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNHIEDSNSPQYSVFQCYNSSGGVFSSPCSPSASENNNHRETATNNNPTNFRHTTRHFLTSYASEFHPSLVFSPPKNAPVCSITGAASSSSKDDDVRLVLDILLRKKKKNTVIVGDSLSLTEGLVGEIMGRLERSEVPDELKSIHFIKFQISHVSLSCMKRDEVEMKLLELERKVNSIASGGGGGIFYIGDLKWTVEEASLSGKEEGSPNGEVSGYNPVDHLVSEIGKLFCDCGTSNNAKVWLMATASYQTYMRCQMRQPPLEKQWALQAVPVPSGGLGLSLHAPSVLDSKMTISHNQSQVLETKPFGNMEQEDKLNCCEECASNYEKEAQFIRPDQKKRLPFWLQSHITEDHKKDELVQLKRKWNRLCHCLHQSKQPQNQWNWNHNSYNSPSSISFASNATHGSTSKLVPRFRRQQSCIIEFNFGKKREATEPVLDSLESMEGKEVKTTLALGNGGSGESAVGDITDTTLQRAHICKLLQENVPWQSETFPSIAEALIDSKSAKESNNITWLLMQGNDTIGKRRLALAIAESVFGSTNLLLQFDMLKRETSIAPFSEMLEGALKTHHQLVMLIENVDFADAQFKKFLCDGFETGNFGNFTEENSSQVIFILTNGGSGSTNIEQQNEDSVMRLLWQVSETKPNLETPSVTTTIAEPCFGHKRRAELDMFSNTNSFQGSKKKEFSRQTSFNTLDLNMKADEGDKAGESSPISSDQTGETIADPLNQNGFLDSIVNRFEFNTNPVKDREMAELFLCKFKESFEEVYGKKCLENLSVDERVIEDVGVGCGYFTNSLFEKWLKDVFQSSLETVNFGGKEGILFRLSWGGKGDRKSDSGFMSSSLPKSIQVNYFIE* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0490 1010 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 974 - -
Gso17g0490 1010 PANTHER PROTEIN SMAX1-LIKE 5 1 974 - -
Gso17g0490 1010 Gene3D - 621 818 IPR027417 -
Gso17g0490 1010 MobiDBLite consensus disorder prediction 187 210 - -
Gso17g0490 1010 Pfam Clp amino terminal domain, pathogenicity island component 26 53 IPR004176 -
Gso17g0490 1010 Pfam Clp amino terminal domain, pathogenicity island component 130 165 IPR004176 -
Gso17g0490 1010 Gene3D - 9 169 IPR036628 -
Gso17g0490 1010 SUPERFAMILY Double Clp-N motif 12 164 IPR036628 -
Gso17g0490 1010 ProSiteProfiles Clp repeat (R) domain profile. 8 169 IPR004176 -
Gso17g0490 1010 MobiDBLite consensus disorder prediction 857 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0490 Gso-Chr17 4435728 4439909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0490 - - gmx:100816045 1989.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0490 17 4435728 4439909 Gso17g0490 17 4435728 4439909 ECH
Gso13g0731 13 21587044 21591289 Gso17g0490 17 4435728 4439909 GST
Gso17g0490 17 4435728 4439909 Gso15g1372 15 14699731 14704485 PCT
Gso17g0490 17 4435728 4439909 Gso9g0512 9 5584215 5588941 PCT
Gso15g1372 15 14699731 14704485 Gso17g0490 17 4435728 4439909 PCT
Gso9g0512 9 5584215 5588941 Gso17g0490 17 4435728 4439909 PCT