Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1372 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTCGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCTGCAACTTTGCTCAGCCTAAGAGCCAGCTCCTTAAGAAGGGCTTGTCTCAAGTCTCAGCCACAAACACATTCTCATTCTCATTCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTTGCCCTCAACAGGCTCCCAACCACACCTGCTGCTGCTGCTGCAGGCCCTTTGCTCCACACACAGCACCCCTCTCTCTCCAATGCTCTCATTGCTGCTCTCAAGAGAGCACAGGCACACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCTCTTCTCACCATCAAGGTTGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGTGTTAGTAGGGTTATGAGGGAAGCTGGTTTTTCAAGCACTGCTGTGAAGAGCAACATTGAGGACACTTCTAATTCAGCACCTTCTGTTTTCTACAACAGTTCTGGTGGTGGTGTTTTCTCTTCTCCTTGCTCACCTTCCCCCAGTGAGAACAACAACACTGCTAGTGTTTTCAGGCAAAACCATTTCCTTGCTGCCTACACTTCTAATGAATTTAGTACTTCTCCTTCTCCACCACTTTTGTTCAAGAAGGCTTCAGTGTTTCCCATCACTGAGTCACCACCACCTTCTTCTTCTTCCAAAGACGATATCAAGGTGGTGCTTGATGTCCTCTTGAGGAAGAAGAAGAGGAACGCTGTGATAGTTGGTGACTCAGTGGCACTCACTGAGGGTCTTGTGGGGGAGCTTATGGGGAAGCTGGAGAGAGGAGAGGTCCCTGATGAGTTGAAGTCTACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTTTGAGGTTCATGAAGAGGGATGAAGTGGAGATGAGCCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAAGTGGAGGTGGAGCCATTTTCTATGTTGGAGACCTGAAGTGGACAGTGGAAGGAACAAGTGAAACAGAGGAAGGTGGTGGTGTTTGTGGCTATTATAACCCTGTTGTTGATCATCTTGTTGCTGAAGTAGGGAAGTTGTTTTGTGACTCCAACACTACTAAGGTGTGGCTTTTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGCCTCCATGCTTCCAGTGTTCATGATTCAAAGGTGACAATCTCCCAGAATCCATCTCATATGATGGAAACAAAGTTCTTCAGTAACAACAAGGAGGAGCAGGATAAACTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGGACAGAAGAAACTGTTACCATCCTGGCTTCAGTCTCATACCACCGAAGCCCATCTAAAGGATGAGTTAACTCAGCTGAAAAGGAAATGGAACAGACTGTGCCACTGTCTGCACCAGAGCAAGCAGCCTCAGAACCAATGGAGCAACACTTTACATGGAAATTATCACAGTTCAAATGGCAAGATCTACCCTTACAATTCATCATACCCCTGTTGGCCAAACCAAGGCAGTGTCTTCACAGATTCAAGCTCCATATCTTTTGCTGATTCACCTGCTGCGAAACCTGCTTATAGCTCCAACAACATAGTCCCTCGGTTCAGGCGCCAGCAATCATGCTCCATTGAGTTCAATTTCAGTGATGTGACTCAGAAAAAGCCATCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAGTGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCGGGGCAAACGGTCGAAAATATCATAACTACTACTGATAGAACACTGCGAAGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCTGAGGCATTGGTTGATTCCAAATCTGCAAAGCCAAGTGCCACTACTTGGCTTTTGTTGCAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCACGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATTTTCTCCTTCACTTGGACATGCTGAAAAACAACAAGGAGAATTCAGCAACCCCATTTTGTGAAATGGTAGCTGGAGCACTGAAGAGCCATGAGAAGCTTGTGATTCTGATAGAAAGTTTGGATTTTGCAGATGCCCAATTCAGGAAGTTCCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGCATGACTGAGGAGAGTTCAGGCCAAGCAATATTCATACTGACCAATGGTGACACTAGGAGCAATGAAGAGAAGAAAACCAACGACTCGGTGATGAAGTTGGTGCTGCAGATAAGTGAAACCAAGCCTACTTTGGAGTCTTCTCCACATTGTTTGGGCCAGAAGAGAAGGGCTGAAATACTTGATTTGTTTACCAAGGTTAAGAATCCAAGGGTTGAGGAGAAGGAAGAGGGTAGAAAAGTCTTTTTAAGGCATTCAAGCTTCAACCATCTTGACCTGAACATGAAAGCTGATGAAGAAGAGGATGATGATGAAGGGGAAGAGAAAACAGGTGGAAGTAGTCCAATATCAAGTGATTTGACAAGGGAAACAGTGGTTGATCCATTGAGCTGGAATGGTGCACTTGAGTCAATTGAGAACCGGTTTGAGTTGAATGAAGGTCCAGAGAGGGAGAGGGAGGTGGCAGATATGTTTCTGTCAAGGATAAAAGAGTCTTTTGAGGAGGTATATGATGATGATGATGGGGTGGTGGTGAATTTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTGTGGTAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTATTACAGACAGTTAACTTTGGTGATAAGGGGAAGGAAGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATCGGATAGTGATGGGTTCATGGGTTCATGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA 3180 0.4547 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPQTHSHSHSHPLQCRALELCFNVALNRLPTTPAAAAAGPLLHTQHPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDTSNSAPSVFYNSSGGGVFSSPCSPSPSENNNTASVFRQNHFLAAYTSNEFSTSPSPPLLFKKASVFPITESPPPSSSSKDDIKVVLDVLLRKKKRNAVIVGDSVALTEGLVGELMGKLERGEVPDELKSTHFIKFQLAPVSLRFMKRDEVEMSLSALKRKVDSVASSGGGAIFYVGDLKWTVEGTSETEEGGGVCGYYNPVVDHLVAEVGKLFCDSNTTKVWLLATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKVTISQNPSHMMETKFFSNNKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHLKDELTQLKRKWNRLCHCLHQSKQPQNQWSNTLHGNYHSSNGKIYPYNSSYPCWPNQGSVFTDSSSISFADSPAAKPAYSSNNIVPRFRRQQSCSIEFNFSDVTQKKPSSTALDSLKGMEGNNSEVKITLALGNSTFGGSGQTVENIITTTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKPSATTWLLLQGTDSIGKTRLARAIAESVFGSVDFLLHLDMLKNNKENSATPFCEMVAGALKSHEKLVILIESLDFADAQFRKFLADGFETAKFGNLSMTEESSGQAIFILTNGDTRSNEEKKTNDSVMKLVLQISETKPTLESSPHCLGQKRRAEILDLFTKVKNPRVEEKEEGRKVFLRHSSFNHLDLNMKADEEEDDDEGEEKTGGSSPISSDLTRETVVDPLSWNGALESIENRFELNEGPEREREVADMFLSRIKESFEEVYDDDDGVVVNFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLLQTVNFGDKGKEGGIGFTLCWGGKGDRKSDSDGFMGSCLPKNVQVNYFMD* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1372 1059 Gene3D - 9 180 IPR036628 -
Gso15g1372 1059 ProSiteProfiles Clp repeat (R) domain profile. 8 180 IPR004176 -
Gso15g1372 1059 SUPERFAMILY Double Clp-N motif 12 175 IPR036628 -
Gso15g1372 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 673 811 IPR027417 -
Gso15g1372 1059 Coils Coil 466 486 - -
Gso15g1372 1059 PANTHER PROTEIN SMAX1-LIKE 5 1 1034 - -
Gso15g1372 1059 Gene3D - 650 860 IPR027417 -
Gso15g1372 1059 Pfam Clp amino terminal domain, pathogenicity island component 141 176 IPR004176 -
Gso15g1372 1059 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Gso15g1372 1059 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1034 - -
Gso15g1372 1059 MobiDBLite consensus disorder prediction 888 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1372 Gso-Chr15 14699731 14704485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1372 - - gmx:102660146 1984.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1372 15 14699731 14704485 Gso9g0512 9 5584215 5588941 GST
Gso13g0731 13 21587044 21591289 Gso15g1372 15 14699731 14704485 PCT
Gso17g0490 17 4435728 4439909 Gso15g1372 15 14699731 14704485 PCT
Gso15g1372 15 14699731 14704485 Gso13g0731 13 21587044 21591289 PCT
Gso15g1372 15 14699731 14704485 Gso17g0490 17 4435728 4439909 PCT