Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0464 ATGGGTTCACGGGTTCTAATCGAGAATTTACCAAGGGGGAATTTTTGTACCCTGCTGTTAGTTTTGTGGGTTTGTGCAGTTACAGCCTCTGTGACTTATGATCACAAAGCCATTGTTGTTAATGGCCAGAGAAGAATTTTGATCTCTGGTTCCATTCACTACCCAAGAAGCACACCTGAGATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCTTAGATGTTATCCAAACCTATGTGTTTTGGAATGGACATGAGCCTTCTCCCGGAAAGTATTATTTCGAGGATAGGTACGACTTGGTTAAGTTCATCAAGCTGGTACAGCAAGCTGGTCTCTATGTTCATCTCCGCATTGGTCCCTACATATGTGCTGAATGGAACTTTGGGGGGTTTCCTGTTTGGCTCAAGTATGTTCCGGGTATTGCTTTCAGAACAGACAATGAACCTTTCAAGGCTGCAATGCAAAAATTTACTGAGAAGATTGTCAGCATTATGAAGGAGGAGAAATTGTTCCAGACGCAGGGAGGTCCGATAATTATGTCACAGATTGACACCTGCAATGGATACTACTGCGAAAACTTTACTCCCAACAAGAAATACAAACCCAAAATGTGGACAGAGAACTGGACTGGCTGGTACACTGAGTTTGGAGGCGCGGTCCCTCGTAGACCTGCAGAAGACATGGCATTCTCAGTTGCAAGATTCGTACAGAATGGTGGTTCATTTGTTAATTACTATATGTACCATGGAGGAACTAACTTTGATCGGACATCCAGTGGCCTCTTCATTGCCACCAGCTATGACTATGACGGTCCTATTGATGAATACGGACTTCTAAATGAACCAAAATGGGGGCATCTTAGAGATTTGCATAAAGCAATAAAGCTATGTGAGCCAGCTTTAGTGTCTGTAGATCCAACAGTGACATGGCCAGGAAATAACCTTGAGGTACATGTGTTCAAGACTTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAAATCTTCCGCATCAGTTAAATTTGGAAATGGACAATATGACCTACCACCATGGTCTATCAGCATCCTTCCTGATTGCAAAACTGCAGTTTTCAACACTGCGAGGCTTGGTGCTCAAAGCTCTCTGATGAAGATGACTGCCGTGAACAGTGCATTTGATTGGCAGTCATACAATGAAGAGCCTGCATCATCCAATGAGGATGATTCTTTGACAGCATATGCACTCTGGGAGCAGATTAATGTCACCCGAGATTCTACAGATTATTTGTGGTATATGACAGATGTCAACATTGATGCAAATGAAGGTTTTATAAAGAATGGACAATCTCCTGTTCTTACCGTAATGTCAGCAGGCCATGTTTTGCATGTTTTAATTAATGATCAACTTTCAGGTACCGTGTACGGGGGACTGGACTCTCATAAGTTAACATTTAGTGACAGTGTTAAGCTGAGGGTTGGCAATAACAAGATTTCTTTACTAAGTATTGCCGTGGGTCTCCCGAATGTTGGGCCACACTTTGAGACATGGAATGCTGGGGTGTTAGGTCCAGTCACACTTAAGGGTCTAAATGAGGGGACTAGAGACTTGTCTAAACAGAAATGGTCTTACAAGATTGGTCTCAAGGGTGAAGCCTTAAACCTTAACACTGTCAGTGGTAGTTCCTCCGTGGAATGGGTACAAGGATCATTATTGGCTAAACAGCAACCTTTGGCATGGTACAAGACAACTTTTAGCACACCAGCAGGCAACGATCCGTTAGCTCTGGACATGATTAGCATGGGAAAGGGTCAGGCATGGATAAACGGTCGAAGCATTGGACGCCATTGGCCTGGATATATAGCACGCGGTAACTGTGGGGATTGTTATTATGCTGGAACTTACACTGATAAAAAATGCCGGACAAATTGTGGAGAACCCTCCCAGAGATGGTACCATATTCCTCGGTCGTGGCTGAACCCAAGTGGGAACTATCTGGTTGTGTTTGAAGAATGGGGAGGTGATCCTACTGGAATTACTTTGGTGAAAAGAACAACAGCAAGTGTGTGTGCTGATATATACCAAGGGCAACCAACTCTTAAGAACAGACAGATGCTAGACTCTGGCAAAGTTGTTAGACCCAAGGCTCACTTGTGGTGTCCACCTGGGAAAAACATCTCTCAGATTAAATTTGCTAGTTATGGATTGCCACAGGGAACTTGTGGAAACTTTAGAGAAGGAAGTTGTCATGCTCACAAATCATATGATGCTCCTCAAAAGAACTGCATTGGCAAGCAATCTTGCTTGGTGACTGTAGCTCCTGAAGTTTTTGGGGGAGACCCGTGTCCGGGAATTGCAAAGAAGCTCTCACTTGAAGCACTATGCGGATAA 2376 0.4394 MGSRVLIENLPRGNFCTLLLVLWVCAVTASVTYDHKAIVVNGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTEKIVSIMKEEKLFQTQGGPIIMSQIDTCNGYYCENFTPNKKYKPKMWTENWTGWYTEFGGAVPRRPAEDMAFSVARFVQNGGSFVNYYMYHGGTNFDRTSSGLFIATSYDYDGPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGNNLEVHVFKTSGACAAFLANYDTKSSASVKFGNGQYDLPPWSISILPDCKTAVFNTARLGAQSSLMKMTAVNSAFDWQSYNEEPASSNEDDSLTAYALWEQINVTRDSTDYLWYMTDVNIDANEGFIKNGQSPVLTVMSAGHVLHVLINDQLSGTVYGGLDSHKLTFSDSVKLRVGNNKISLLSIAVGLPNVGPHFETWNAGVLGPVTLKGLNEGTRDLSKQKWSYKIGLKGEALNLNTVSGSSSVEWVQGSLLAKQQPLAWYKTTFSTPAGNDPLALDMISMGKGQAWINGRSIGRHWPGYIARGNCGDCYYAGTYTDKKCRTNCGEPSQRWYHIPRSWLNPSGNYLVVFEEWGGDPTGITLVKRTTASVCADIYQGQPTLKNRQMLDSGKVVRPKAHLWCPPGKNISQIKFASYGLPQGTCGNFREGSCHAHKSYDAPQKNCIGKQSCLVTVAPEVFGGDPCPGIAKKLSLEALCG* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0464 791 PANTHER BETA-GALACTOSIDASE 184 680 - -
Gso17g0464 791 PANTHER BETA-GALACTOSIDASE 17 185 - -
Gso17g0464 791 Gene3D Glycosidases 25 188 - -
Gso17g0464 791 Gene3D - 544 685 - -
Gso17g0464 791 Gene3D - 388 536 - -
Gso17g0464 791 PANTHER BETA-GALACTOSIDASE RELATED 17 185 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PANTHER BETA-GALACTOSIDASE RELATED 184 680 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 Gene3D - 704 791 IPR043159 -
Gso17g0464 791 Gene3D Glycosidases 189 299 - -
Gso17g0464 791 Pfam Glycosyl hydrolases family 35 194 294 IPR031330 -
Gso17g0464 791 Pfam Glycosyl hydrolases family 35 38 189 IPR031330 -
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 571 585 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 PRINTS Glycosyl hydrolase family 35 signature 598 614 IPR001944 GO:0004553|GO:0005975
Gso17g0464 791 Pfam Galactose binding lectin domain 713 790 IPR000922 GO:0030246
Gso17g0464 791 Pfam Beta-sandwich domain in beta galactosidase 302 371 IPR041392 -
Gso17g0464 791 SUPERFAMILY Galactose-binding domain-like 536 694 IPR008979 -
Gso17g0464 791 SUPERFAMILY Galactose-binding domain-like 356 526 IPR008979 -
Gso17g0464 791 ProSiteProfiles SUEL-type lectin domain profile. 705 791 IPR000922 GO:0030246
Gso17g0464 791 SUPERFAMILY (Trans)glycosidases 30 299 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0464 Gso-Chr17 4184964 4190557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0464 18 790 Glycoside Hydrolase AT3G13750 66.626 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0464 - - gmx:100810170 1645.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0464 17 4184964 4190557 Gso17g0464 17 4184964 4190557 ECH
Gso13g0750 13 21814800 21820558 Gso17g0464 17 4184964 4190557 GST
Gso17g0464 17 4184964 4190557 Gso15g1392 15 15222004 15228355 PCT
Gso17g0464 17 4184964 4190557 Gso9g0532 9 5935661 5942127 PCT
Gso15g1392 15 15222004 15228355 Gso17g0464 17 4184964 4190557 PCT
Gso9g0532 9 5935661 5942127 Gso17g0464 17 4184964 4190557 PCT