Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1392 ATGGGGAAGAGAGAGTTTCATGGGGTGGTGTTGATGTCGTTGTGTTTGTGGGTTTGTGGTGTCACAGCCTCTGTGACTTATGACCACAAGGCCATTGTGGTTGATGGTAAGAGAAGAATTTTGATCTCTGGCTCCATTCACTACCCTAGAAGCACACCTCAAATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCCTTGATGTCATTCAGACCTATGTGTTTTGGAATGGCCATGAACCTTCTCCTGGGCAATACTATTTCGAAGATAGGTTCGACTTGGTTAAATTCGTGAAGCTCGTGCAGCAAGCAGGCCTCTATGTTCATCTCCGTATTGGTCCCTACATATGTGCTGAATGGAACTTCGGGGGATTTCCTGTCTGGCTCAAGTATGTTCCAGGCATTGCTTTCAGAACCGACAATGAGCCGTTCAAGGCGGCAATGCAAAAATTCACTGCAAAGATTGTTAGCTTGATGAAAGAAAATAGGTTGTTTCAATCCCAGGGTGGTCCAATAATTATGTCACAGATTGAGAACGAGTATGGACCGGTTGAATGGGAAATTGGTGCTCCTGGAAAAGCTTATACGAAATGGGCTGCACAAATGGCTGTTGGTCTAGACACTGGTGTTCCATGGGTTATGTGCAAGCAAGAAGATGCTCCTGATCCTGTTATTGACACTTGCAATGGATACTACTGTGAAAACTTCAAGCCCAACAAGAACACCAAACCCAAAATGTGGACTGAGAATTGGACTGGGTGGTACACTGATTTTGGTGGTGCAGTCCCTCGTAGACCAGCAGAAGACTTGGCATTCTCGGTTGCAAGATTCATACAGAATGGTGGTTCATTTGTTAACTACTATATGTACCATGGAGGAACGAACTTTGGCCGGACATCTGGTGGCCTCTTTATTGCCACTAGCTATGACTATGATGCGCCGCTTGATGAATATGGACTTCAAAATGAACCAAAGTATGAGCATTTGAGAAATTTGCATAAAGCAATAAAACAATGTGAACCTGCTCTAGTGGCTACAGATCCCAAAGTTCAATCGCTTGGATATAACCTTGAGGCACATGTGTTCTCGACCCCTGGTGCTTGTGCTGCATTCATTGCAAATTATGACACCAAATCTTATGCAAAAGCTACATTTGGAAATGGGCAATATGATCTACCACCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGTTGTTTACAACACAGCAAAGGTTGGTAACAGCTGGCTGAAAAAGATGACTCCAGTAAACAGTGCATTTGCTTGGCAGTCATACAATGAAGAACCTGCCTCATCCAGTCAAGCTGATTCCATTGCAGCATATGCACTTTGGGAGCAGGTCAACGTGACCCGCGATTCTTCAGATTATTTGTGGTATATGACAGATGTCTACATTAATGCTAATGAAGGATTCTTAAAGAATGGACAATCTCCTGTTCTCACCGCAATGTCAGCAGGCCATGTTCTCCATGTTTTCATTAATGATCAACTTGCAGGAACTGTGTGGGGGGGATTGGCAAATCCTAAATTAACATTTAGTGACAATGTGAAACTGAGGGTTGGCAATAACAAGCTTTCTTTACTTAGTGTTGCTGTCGGTCTCCCGAATGTTGGTGTGCACTTTGAAACATGGAATGCGGGGGTGTTAGGCCCAGTCACTCTGAAGGGTCTAAATGAGGGGACTCGGGACTTGTCCAGTCAGAAATGGTCTTACAAGGTTGGACTGAAAGGTGAATCGTTGAGCCTTCACACTGAAAGTGGGAGTAGCTCTGTTGAATGGATACGAGGATCATTAGTGGCTAAAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCGCACCGGCTGGCAATGATCCATTGGCTCTAGATTTGGGAAGCATGGGAAAGGGTGAAGTATGGGTAAACGGTCGCAGCATTGGTCGCCATTGGCCTGGATATATAGCACATGGTAGTTGCAATGCTTGTAATTATGCTGGATTTTATACTGATACAAAATGCCGGACGAATTGTGGACAACCTTCTCAGAGATGGTACCATGTTCCTCGCTCATGGCTGAGCTCAGGTGGTAACTCCTTGGTTGTGTTTGAAGAATGGGGAGGTGACCCTAATGGAATTGCTTTGGTGAAAAGAACATGA 2166 0.4441 MGKREFHGVVLMSLCLWVCGVTASVTYDHKAIVVDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRFDLVKFVKLVQQAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTAKIVSLMKENRLFQSQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWVMCKQEDAPDPVIDTCNGYYCENFKPNKNTKPKMWTENWTGWYTDFGGAVPRRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTSGGLFIATSYDYDAPLDEYGLQNEPKYEHLRNLHKAIKQCEPALVATDPKVQSLGYNLEAHVFSTPGACAAFIANYDTKSYAKATFGNGQYDLPPWSISILPDCKTVVYNTAKVGNSWLKKMTPVNSAFAWQSYNEEPASSSQADSIAAYALWEQVNVTRDSSDYLWYMTDVYINANEGFLKNGQSPVLTAMSAGHVLHVFINDQLAGTVWGGLANPKLTFSDNVKLRVGNNKLSLLSVAVGLPNVGVHFETWNAGVLGPVTLKGLNEGTRDLSSQKWSYKVGLKGESLSLHTESGSSSVEWIRGSLVAKKQPLTWYKTTFSAPAGNDPLALDLGSMGKGEVWVNGRSIGRHWPGYIAHGSCNACNYAGFYTDTKCRTNCGQPSQRWYHVPRSWLSSGGNSLVVFEEWGGDPNGIALVKRT* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1392 721 Gene3D - 431 578 - -
Gso15g1392 721 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Gso15g1392 721 Gene3D Glycosidases 19 341 - -
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PANTHER BETA-GALACTOSIDASE RELATED 5 721 IPR001944 GO:0004553|GO:0005975
Gso15g1392 721 PANTHER BETA-GALACTOSIDASE 5 721 - -
Gso15g1392 721 SUPERFAMILY Galactose-binding domain-like 577 716 IPR008979 -
Gso15g1392 721 SUPERFAMILY (Trans)glycosidases 25 341 IPR017853 -
Gso15g1392 721 Pfam Beta-sandwich domain in beta galactosidase 344 414 IPR041392 -
Gso15g1392 721 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Gso15g1392 721 SUPERFAMILY Galactose-binding domain-like 398 567 IPR008979 -
Gso15g1392 721 Gene3D - 585 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1392 Gso-Chr15 15222004 15228355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1392 9 721 Glycoside Hydrolase AT3G52840 68.575 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1392 - - gmx:100781959 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1392 15 15222004 15228355 Gso9g0532 9 5935661 5942127 GST
Gso13g0750 13 21814800 21820558 Gso15g1392 15 15222004 15228355 PCT
Gso17g0464 17 4184964 4190557 Gso15g1392 15 15222004 15228355 PCT
Gso15g1392 15 15222004 15228355 Gso13g0750 13 21814800 21820558 PCT
Gso15g1392 15 15222004 15228355 Gso17g0464 17 4184964 4190557 PCT