Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0750 ATGGGTTCACGGGTTCTAATGGAGAATTTACCAAGGGGGAATTTTTATACCCTGCTGTTGGTTTTGTGGGTTTGTGCAGTTACAGCCTCTGTGACTTATGATCACAAAGCCATTGTTGTTAATGGCCAGAGAAGAATTTTGATTTCTGGTTCCATTCACTACCCAAGAAGCACACCAGAGATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCTTAGATGTTATCCAAACCTACGTGTTTTGGAATGGACATGAGCCTTCTCCAGGAAAGTATTATTTCGAGGATAGGTACGACTTGGTTAAGTTCATCAAGCTGGTGCAGCAAGCTGGCCTTTCTGTTCATCTCCGCATTGGTCCCTACATATGTGCTGAATGGAACTTTGGGGGGTTTCCTGTTTGGCTCAAGTATGTTCCGGATATTGCTTTCAGAACAGACAATGAACCTTTCAAGGCAGCAATGCAAAAATTTACTGAGAAGATTGTGAGCATGATGAAGGCGGAGAAATTGTTCCAGACGCAGGGAGGTCCAATAATTATGTCGCAGATAGAAAACGAATATGGAACAGTGGAGTGGGAAATTGGTGCCCCAGGAAAAGCTTATACCAAATGGTTTTCTCAAATGGCTGTGGGTTTAGATACTGGTGTCCCCTGGATTATGTGCAAGCAACAAGATACTCCGGATCCTATTATTGACACCTGCAATGGATACTACTGCGAAAACTTTACTCCCAACAAGAAATACAAACCCAAAATGTGGACAGAGAACTGGACTGGCTGGTACACTGAGTTTGGAGGCGCGGTCCCTCGTAGACCTGCAGAAGACATGGCCTTCTCAGTTGCAAGATTCGTACAGAATGGTGGTTCATTTGTTAATTATTATATGTACCATGGAGGAACTAACTTTGATCGGACATCCAGTGGCCTCTTCATTGCCACCAGCTATGACTATGACGGTCCTATTGATGAATACGGACTTCTAAATGAACCAAAATGGGGTCATCTAAGAGATTTGCATAAAGCAATAAAGCTATGTGAGCCAGCTTTAGTGTCTGTAGATCCCACAGTGACATGGCCAGGAAATAACCTGGAGGTACATGTGTTCAAGACTTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAAATCTTCCGCAGCAGTTAAATTTGGAAATGGACAATATGACCTACCACCTTGGTCTATCAGCATCCTTCCTGACTGCAAAACTGCAGTTTTCAACACAGCGAGGCTTGGTGCTCAAAGCTCTCTGATGAAGATGACTGCCGTAAACAGTGCATTTGATTGGCAGTCATACAATGAAGAGGCTGCATCGTCCAATGAGGATGATTCCTTGACAGCATATGCACTCTGGGAGCAGATTAATGTCACCCGAGATTCTACAGATTATTTGTGGTATATGACAGATGTCAACATTGATGCAAATGAAGGTTTTATAAAGAATGGACAATCTCCTGTTCTTACCGTAATGTCAGCAGGCCATGCTTTGCATGTTTTCATTAATGGTCAACTTTCAGGTACTGTGTACGGGGGACTGGACTCTCATAAGTTAACATTTAGTGACAGTGTTAAGCTGAGGGTTGGCAATAACAAGATTTCTTTGCTAAGTATTACCGTGGGTCTCCCGAATGTTGGGCCACACTTTGAGACATGGAATGCTGGGGTTTTAGGCCCAGTCACACTTAAGGGTCTAAATGAGGGGACTAGAGACTTGTCTAAACAGAAATGGTCTTACAAGATTGGTCTCAAGGGTGAAGCCTTAAACCTTAACACTGTAAGTGGTAGTTCCTCCGTTGAATGGGTACAAGGATCATTATTGACTAAGAAGCAACCTTTGACATGGTACAAGACAACTTTTAGCACACCAGCAGGCAACGATCCGTTAGCTCTAGACATGATTAGCATGGGAAAGGGTCAGGTATGGATAAACGGTCGAAGCATTGGACGCCATTGGCCTGGATATATAGCACGTGGTAGTTGTGGGGATTGTTATTATGCTGGGACTTACACTGATAAAAAATGCCGGACAAATTGTGGAGAACCATCCCAGAGATGGTACCATATTCCTCGGTCGTGGCTGAACCCAAGCGGCAACTATCTGGTTGTGTTTGAAGAATGGGGAGGTGATCCTACTGGAATTTCTTTGGTGAAAAGAACAACAGCAAGTGTGTGCGCTGATATATTTGAAGGGCAACCAACTCTGAAGAACAGGCAGATGCTAGACTCTGGCAAAGTTATTAGACCCAAGGCTCACTTGTGGTGTCCACCTGGGCAAAAGATCTCTAAGATTAAATTTGCAAGTTATGGATTGCCACATGGAACTTGTGGAAACTTCAGAGAAGGAAGTTGTCATGCTCACAAATCATATGATGCTCCTCAAAAGAACTGCATTGGCAAGCAATCTTGCTTGGTGACTGTAGCTCCTGAAGTTTTTGGGGGAGACCCGTGTCCGGGAATTGCAAAGAAGTTCTCACTTGAGGCACTATGCAGCTAG 2520 0.4405 MGSRVLMENLPRGNFYTLLLVLWVCAVTASVTYDHKAIVVNGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLSVHLRIGPYICAEWNFGGFPVWLKYVPDIAFRTDNEPFKAAMQKFTEKIVSMMKAEKLFQTQGGPIIMSQIENEYGTVEWEIGAPGKAYTKWFSQMAVGLDTGVPWIMCKQQDTPDPIIDTCNGYYCENFTPNKKYKPKMWTENWTGWYTEFGGAVPRRPAEDMAFSVARFVQNGGSFVNYYMYHGGTNFDRTSSGLFIATSYDYDGPIDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGNNLEVHVFKTSGACAAFLANYDTKSSAAVKFGNGQYDLPPWSISILPDCKTAVFNTARLGAQSSLMKMTAVNSAFDWQSYNEEAASSNEDDSLTAYALWEQINVTRDSTDYLWYMTDVNIDANEGFIKNGQSPVLTVMSAGHALHVFINGQLSGTVYGGLDSHKLTFSDSVKLRVGNNKISLLSITVGLPNVGPHFETWNAGVLGPVTLKGLNEGTRDLSKQKWSYKIGLKGEALNLNTVSGSSSVEWVQGSLLTKKQPLTWYKTTFSTPAGNDPLALDMISMGKGQVWINGRSIGRHWPGYIARGSCGDCYYAGTYTDKKCRTNCGEPSQRWYHIPRSWLNPSGNYLVVFEEWGGDPTGISLVKRTTASVCADIFEGQPTLKNRQMLDSGKVIRPKAHLWCPPGQKISKIKFASYGLPHGTCGNFREGSCHAHKSYDAPQKNCIGKQSCLVTVAPEVFGGDPCPGIAKKFSLEALCS* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 Gene3D - 591 733 - -
Gso13g0750 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
Gso13g0750 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Gso13g0750 839 Pfam Glycosyl hydrolases family 35 38 342 IPR031330 -
Gso13g0750 839 SUPERFAMILY Galactose-binding domain-like 584 743 IPR008979 -
Gso13g0750 839 Gene3D - 437 584 - -
Gso13g0750 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Gso13g0750 839 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Gso13g0750 839 Gene3D - 753 839 IPR043159 -
Gso13g0750 839 PANTHER BETA-GALACTOSIDASE RELATED 17 728 IPR001944 GO:0004553|GO:0005975
Gso13g0750 839 PANTHER BETA-GALACTOSIDASE 17 728 - -
Gso13g0750 839 Gene3D Glycosidases 24 346 - -
Gso13g0750 839 SUPERFAMILY Galactose-binding domain-like 404 574 IPR008979 -
Gso13g0750 839 Pfam Beta-sandwich domain in beta galactosidase 350 419 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0750 Gso-Chr13 21814800 21820558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0750 18 839 Glycoside Hydrolase AT3G13750 71.014 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0750 - - gmx:106795462 1769.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0750 13 21814800 21820558 Gso17g0464 17 4184964 4190557 GST
Gso13g0750 13 21814800 21820558 Gso15g1392 15 15222004 15228355 PCT
Gso13g0750 13 21814800 21820558 Gso9g0532 9 5935661 5942127 PCT
Gso15g1392 15 15222004 15228355 Gso13g0750 13 21814800 21820558 PCT
Gso9g0532 9 5935661 5942127 Gso13g0750 13 21814800 21820558 PCT