Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0459 ATGGCAAGTTATTATTATAGATTTTCAAAAGCTTTGATTATGCTATGTTTAACTTGCATAGTGTTGATCACACAGGCACAATCACAAACATGGTCATTACTCCAAGCACCAAAAGAAATAACCCTTAAGCTCATTCGTGACCCCGTGACCCTTTCACTAGCCTCAATTGATTATGGCCACATAGTTCATGACAACCCTTTTGCAATATTTGCCCCATCTTCCATTAGTGACATCTCACTCTTGATAAATTTCTCAAATTCTCTGGCCATCCCTATCACCATAGCTCCTAGAGGGCAAGCCCACTCGGTTCATGGACAAGCCATGACAAATCATGGGGTTGTGGTGAACATGACTGAGTTGAATGGCTTTAGAAATGGTGATGGGATTGTAGTAGTGGTTGATGACACAACTATTGGTCCATATGCAGATGTGGGTGGTGAACAAATTTGGATTGATGTGTTGCATGCAACACTCGAGCGTGGACTCACACCCCTCTCTTGGACAGATTACTTGTACTTATCGGTTGGTGGAACTCTCTCCAATGCTGGGATAAGTGGCCAAACCTTCAGGTTTGGTCCTCAGATTTCCAATGTTCATCAATTGGATGTTGTTACGGGGAAAGGAGACCTAGTGACGTGTTCTGCGGAGAACAACTCGGAGTTATTTTACGCCGTTCTAGGAGGTTTAGGCCAATTTGGAATTATAACCAGGGCAAGAATAGCTCTTGGGCCAGCACCAACGAGGGTGAAGTGGCTCCGTTTGCTTTACAACGATTTCTCTGCATTTTCTGGAGACCAAGAACACTTAATCTCTTTCAATGGAATAAACGAGACTAATGCAGCTGATTATGTAGAAGGTTTTCTTTTGCAAAATCAGCCACCACTGGACCTTTCCTTTTATCCAGAACCTGATCAACCTCGCATAACTTCCCTTGTAACCCAATACGGCATCATCTACGTCATAGAACTTGTCAAATATTACGACAATAGTACTCAAGAACACGTTGATGAGGATGTGAAACTTTTGGTCGAGAGATTAAAGTTTTTTCCTACGTTTATGTTTGAAAAAGATGTGTCGTACGAAGAGTTCCTAAACAGGGTTCATGCTGACGAGCTTTTCCTAAGGTCACAAGGGCTTTGGGATGTTCCTCATCCTTGGTTAAACCTCTTTGTTCCAGCATCTCGAATCTCGGATTTCGATGAAGGTGTGTTCAAGGGCATTATTCTCCAGCAAAATATCACTGCAGGACTTGTGATAATCTATCCCATGAACCGAACCAAGTGGGATGATAACATGTCAGCAGTTACACCTCATGATGATGTTTTCTACGTGGTGTCATTTCTTCGTTCAACTGTGTTTGATAAGTTGGAGGAATTTAAGGCTCAAAACCGACAAATATTACAGTTCTGTGCGAATGCTGGTATGGGGATAAAGCAATATCTTCCCCAAAACAAAACTCGGGAAAAATGGGAGGAGCAGTTTGGGCCCAAATGGAAAACTTTCAAACAAAGAAAAGCTCAATTTGATCCCAACAGAATATTGTCACCTGGACAGGGGATTTTCAATTAA 1569 0.4207 MASYYYRFSKALIMLCLTCIVLITQAQSQTWSLLQAPKEITLKLIRDPVTLSLASIDYGHIVHDNPFAIFAPSSISDISLLINFSNSLAIPITIAPRGQAHSVHGQAMTNHGVVVNMTELNGFRNGDGIVVVVDDTTIGPYADVGGEQIWIDVLHATLERGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVHQLDVVTGKGDLVTCSAENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNDFSAFSGDQEHLISFNGINETNAADYVEGFLLQNQPPLDLSFYPEPDQPRITSLVTQYGIIYVIELVKYYDNSTQEHVDEDVKLLVERLKFFPTFMFEKDVSYEEFLNRVHADELFLRSQGLWDVPHPWLNLFVPASRISDFDEGVFKGIILQQNITAGLVIIYPMNRTKWDDNMSAVTPHDDVFYVVSFLRSTVFDKLEEFKAQNRQILQFCANAGMGIKQYLPQNKTREKWEEQFGPKWKTFKQRKAQFDPNRILSPGQGIFN* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0459 522 Pfam FAD binding domain 68 214 IPR006094 GO:0050660
Gso17g0459 522 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 522 - -
Gso17g0459 522 PANTHER GULONOLACTONE OXIDASE 8 522 - -
Gso17g0459 522 Gene3D - 48 521 IPR016167 -
Gso17g0459 522 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 246 521 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gso17g0459 522 Gene3D - 248 480 IPR016170 -
Gso17g0459 522 SUPERFAMILY FAD-linked oxidases, C-terminal domain 246 522 IPR016164 GO:0003824|GO:0050660
Gso17g0459 522 Gene3D - 117 247 IPR016169 -
Gso17g0459 522 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 245 IPR016166 GO:0071949
Gso17g0459 522 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 244 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0459 Gso-Chr17 4152157 4156765 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0459 K00279 - gmx:100808553 1048.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0459 17 4152157 4156765 Gso17g0459 17 4152157 4156765 ECH
Gso13g0756 13 21871257 21876126 Gso17g0459 17 4152157 4156765 GST
Gso17g0459 17 4152157 4156765 Gso9g0538 9 6033304 6038431 PCT
Gso9g0538 9 6033304 6038431 Gso17g0459 17 4152157 4156765 PCT