Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0756 ATGACAAGTTATTATAAAATTTCAAAAGCTTTGATTGTGCTATGTTTAAGCTGTATAGTGTTGATCACACAGGCACAATCACGAACATGGTCATTTCTCCAAGCACCAAAAGAAATAACCCTTAAGCTTATTCGTGACCCCGTGACCCTTTCACTAGCCTCAACTGATTATGGCCACATAGTTCATGACAACCCTTTTGCAATATTTGCTCCATCTTCCATTAGTGACATCTCACTCTTGATAAATTTCTCAAATTCTCTGGCCATCCCTATCACCATAGCTCCTAGAGGGCAAGCCCACTCGATTCATGGACAAGCCATGACAAATGATGGGGTTGTGGTGAACATGACTGAGTTGAATGGCTTTAGAAATGGTGATGGGATTATAGTAGTGTCTGATGACACAACAGCTACAACTATTGGTCCATATGCTGACGTGGGTGGTGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAGCGTGGGCTTACACCCCTCTCTTGGACTGATTACTTGTACTTATCGGTTGGTGGAACTCTCTCCAATGCTGGGATAAGTGGCCAAACCTTCAGGTTTGGTCCCCAGATTTCCAATGTTCATGAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTGCGGAGAACAACTCGGAGTTATTTTACGCCGTTCTGGGAGGTTTAGGCCAATTTGGAATTATAACCAGGGCAAGAATAGCTCTTGGACCAGCACCAACGAGGGTGAAGTGGCTCCGTTTGCTTTACAACAACTTCTCTGCATTTTCTGGAGACCAAGAATACTTAATCTCAGTCAATGGAAGAAATGAGACTAATGCAGCTGATTATGTAGAAGGTTTTCTTTTGCTAAATCAGCCACCACAGGACCTTTCCTTTTATCCAGAACCTGATCATCCTCGCATAACTTCCCTTGTAACCCAATACGGCATCATCTACGTCATAGAACTTGTCAAATATTATGACAATAGTACTCAAGAACACGTTGATGAGGATGTGAATTTTTGGGTCGAGGAATTAAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTGTCGTACGAAGAGTTCCTAAACAGGGTTCATGCTGACGAGCTTTTCCTAAGGTCACAAGGGCTTTGGGATATTCCTCATCCCTGGTTAAACCTCTTTGTTCCAGCATCTCGAATCTCGGATTTCGACGAAGGTGTGTTCAAGGGCATTATTCTCCAGCAAAATATCACTGCAGGACTTGTGATAATCTACCCCATGAACCGAACCAAGTGGGATGATAACATGTCAGCAGTTACACCTCATGATGATGTTTTCTACGTCGTGTCATTTCTTCATTCAACTGGGTTTGATAAGTTGGAGGAATTTCAGGCTCAAAACCAACAAATATTACAGTTCTGTGCGAATGCTGGTATTGGGATAAAGCAATATCTTCCCCAAAACAAAACACGGGAAGAATGGGAGAAGCAGTTTGGCCCCAAATGGAAAACTTTCAAAGAAAGAAAAGCTCAATTTGATCCCAACAGTATATTGTCACCTGGACAGGGGATTTTCAATTAA 1575 0.4203 MTSYYKISKALIVLCLSCIVLITQAQSRTWSFLQAPKEITLKLIRDPVTLSLASTDYGHIVHDNPFAIFAPSSISDISLLINFSNSLAIPITIAPRGQAHSIHGQAMTNDGVVVNMTELNGFRNGDGIIVVSDDTTATTIGPYADVGGEQIWIDVLHATLERGLTPLSWTDYLYLSVGGTLSNAGISGQTFRFGPQISNVHELDVVTGKGDLVTCSAENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNNFSAFSGDQEYLISVNGRNETNAADYVEGFLLLNQPPQDLSFYPEPDHPRITSLVTQYGIIYVIELVKYYDNSTQEHVDEDVNFWVEELKFVPTFMFEKDVSYEEFLNRVHADELFLRSQGLWDIPHPWLNLFVPASRISDFDEGVFKGIILQQNITAGLVIIYPMNRTKWDDNMSAVTPHDDVFYVVSFLHSTGFDKLEEFQAQNQQILQFCANAGIGIKQYLPQNKTREEWEKQFGPKWKTFKERKAQFDPNSILSPGQGIFN* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0756 524 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 248 523 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gso13g0756 524 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 524 - -
Gso13g0756 524 Gene3D - 116 249 IPR016169 -
Gso13g0756 524 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 247 IPR016166 GO:0071949
Gso13g0756 524 PANTHER GULONOLACTONE OXIDASE 8 524 - -
Gso13g0756 524 SUPERFAMILY FAD-linked oxidases, C-terminal domain 248 524 IPR016164 GO:0003824|GO:0050660
Gso13g0756 524 Gene3D - 250 482 IPR016170 -
Gso13g0756 524 Gene3D - 47 523 IPR016167 -
Gso13g0756 524 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 246 IPR036318 GO:0050660
Gso13g0756 524 Pfam FAD binding domain 67 216 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0756 Gso-Chr13 21871257 21876126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0756 K00279 - gmx:100816815 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0756 13 21871257 21876126 Gso17g0459 17 4152157 4156765 GST
Gso13g0756 13 21871257 21876126 Gso9g0538 9 6033304 6038431 PCT
Gso9g0538 9 6033304 6038431 Gso13g0756 13 21871257 21876126 PCT