Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0412 ATGGCCACCACTAATCCAATTCCAAATCTCAATTCCCCACCCTCCCATCCTCCCAATTTCGATTCCGATTCCGATTCCGACATTGACGCCCTCATCGACAGTTTTTTCGAACAACCCTCGCCCTCTCTCCCTCACTACGGATCCAACGCCAACACCACTCTCAAGAGAGGAATTGATGTCCCCTCCGTTGATTATTTCGACACTGCCATATCCATCAAGCGCGGCAGGATTAGCAATGCCGCCACCCACGGCTCTGATGATCAACACCACGCCACCTTTGAAATTCAAAACCCTTCTCCTCCTCCTCCTCTCTCCCAGGATCCTGGAGGACCCATCGCTGATCACAATCACGGAGGAGGAGGAGGAGAAGATCAGCAAGGGAAACGGCCAGTGTTTGAAATTGATTTTATATCTAAGGCTCTCCGTGAAGCTGAATTAGGTTTAGCGCTGAATTCTCACGATAACGCCGACGACTTTGACGACGACGACATGGAACCTAAGAATGAGAATCATGATTTACACTATGTACCAATGAGTTTTTACAGAAGGAATAGGAACATGGAACGTTTCCGAGTGATAGCGAAGAGAAACGCCACTCACTATGCTCGGTTCGACGACTCGGAGGTTGGAGATGAAGGGACATCATTGTATCTTAATCCTCAAGGAAACATTGACGATTCCGAAACTCCATTTTCGATTGCCATGAAGGCGATCAAGGATCGAGCTATGAAGAAGAAGGTGTGTGATGCCTGGGTTCCCAAGAGGAATCCACAAGGGGGGGAGAAGAGGTTTTTTCTGGTGCCTTCTCTTCAAGAACTGTGCCTTGAAATTCTTGCGAATAATGCTGATGCAATGGTTTCGCTTGAGGGTGTACCAGATGAGCTGAGACGCAAGCTTTCCAAGCTGCTCTGTGACTCGAGAAAGATGAATAGTCGATTTCTTGAGCTTCTTCTCAGTGGCTCTCCCACTGAGATTCGGATAAAAGACTGTTCTTGGTTGACGGAGGAACAGTTTGCCAAATCTTTTCAAACGTGTGACACTACAAGATTGGAGGTGCTGCAGCTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGGTACTTTGAGACAGTCACCAAGGTGGTTGCCAAAGTTAATTACCCTGTCCCTCAGTGGTGCGTGCCGCCTGTCAGATAAGGGGTTGCATGTGCTAGTTTCTTCTGCACCAGCACTGAGATCCATTAACCTAAGCCAGTGCTCCCTTCTCTCATCTGCCAGTATTAATATTTTGGCTGATTCATTGGGATCCCTTTTGAAAGAGTTGTATCTAGATGATTGCCTAATGATTGATGCTGCACAAATTGTGCCAGGACTGAAGAAACTTGAACATTTAGAGGTGTTGTCATTGGCTGGCATTCAAACTGTCTCCGATGAATTTATCAAGAATTACATCATTGCATGTGGTCACAACATGAAGGAGCTTATTTTCAAAGACTGTAGAAAATTGACTGATGCATCGATAAAAGTCATTGCTGAACACTGTCCTGGGTTGTGTGCACTTGATCTTATGAACTTGGACAAATTGACAGATTTATCCTTAGGATATCTTACAAATAGTTGTCAAGCACTTCGTACATTGAAGCTCTGCCGCAATCTATTCAGTGATGAAGCAATTGCTGCATTCTTGGAGATTACTGGAGAGTCCTTGAAAGAACTTTCACTTAACAATATTAAGAAGGTTGGCCACCACACAACCATATCACTTGCGAGGCATGCAAAAAATTTGCATACCCTAGATCTATCTTGGTGCCGGAATTTGACAGACAACGAGTTGGGTTTCATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAACTTTTTGGATGCTCACTGGTGACAGATGTTTTTCTGAACGGGCACTCAAACCCAGAGATTCAGATCCTTGGATTGAAGATGTCCCCTTTATTGCAAAATGTCAAAGTGCCTGAACCCTATCAAGGTCCCTTGCGTTATTCACCAGTTTCAGTAGATTTGGTATAA 2028 0.4487 MATTNPIPNLNSPPSHPPNFDSDSDSDIDALIDSFFEQPSPSLPHYGSNANTTLKRGIDVPSVDYFDTAISIKRGRISNAATHGSDDQHHATFEIQNPSPPPPLSQDPGGPIADHNHGGGGGEDQQGKRPVFEIDFISKALREAELGLALNSHDNADDFDDDDMEPKNENHDLHYVPMSFYRRNRNMERFRVIAKRNATHYARFDDSEVGDEGTSLYLNPQGNIDDSETPFSIAMKAIKDRAMKKKVCDAWVPKRNPQGGEKRFFLVPSLQELCLEILANNADAMVSLEGVPDELRRKLSKLLCDSRKMNSRFLELLLSGSPTEIRIKDCSWLTEEQFAKSFQTCDTTRLEVLQLDQCGRCIPDYALLGTLRQSPRWLPKLITLSLSGACRLSDKGLHVLVSSAPALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAAQIVPGLKKLEHLEVLSLAGIQTVSDEFIKNYIIACGHNMKELIFKDCRKLTDASIKVIAEHCPGLCALDLMNLDKLTDLSLGYLTNSCQALRTLKLCRNLFSDEAIAAFLEITGESLKELSLNNIKKVGHHTTISLARHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQNVKVPEPYQGPLRYSPVSVDLV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0412 675 MobiDBLite consensus disorder prediction 80 128 - -
Gso17g0412 675 PANTHER UNCHARACTERIZED 143 668 - -
Gso17g0412 675 Gene3D Ribonuclease Inhibitor 449 563 IPR032675 -
Gso17g0412 675 MobiDBLite consensus disorder prediction 1 58 - -
Gso17g0412 675 MobiDBLite consensus disorder prediction 81 95 - -
Gso17g0412 675 PANTHER F-BOX/LRR PROTEIN 143 668 - -
Gso17g0412 675 MobiDBLite consensus disorder prediction 41 56 - -
Gso17g0412 675 SMART LRR_CC_2 510 535 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 484 509 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 404 429 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 588 613 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 378 403 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 536 560 IPR006553 -
Gso17g0412 675 SMART LRR_CC_2 562 587 IPR006553 -
Gso17g0412 675 Gene3D Ribonuclease Inhibitor 266 448 IPR032675 -
Gso17g0412 675 Gene3D Ribonuclease Inhibitor 564 655 IPR032675 -
Gso17g0412 675 SUPERFAMILY RNI-like 322 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0412 Gso-Chr17 3764481 3769010 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0412 K15082 - gmx:100798274 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0412 17 3764481 3769010 Gso17g0412 17 3764481 3769010 ECH
Gso13g0799 13 22315879 22319143 Gso17g0412 17 3764481 3769010 GST
Gso17g0412 17 3764481 3769010 Gso15g1467 15 16918129 16924310 PCT
Gso15g1467 15 16918129 16924310 Gso17g0412 17 3764481 3769010 PCT