Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0799 ATGAAGAAGAAAGTGTGTGACGCCTGGGTTCCCAAGAGGAATCAAAAAGGGGGGGAGAAGGGCTTTTTTTTTGTGCCCTCTCTTCAAGAACTCTGCCTTGAAATGCTTGCGGATAATGCTGATGCAATGGTTTCGCTTGAGGGTGTACCGGATGAGCTGATACGCAAGCTTTGCAACCTGCTCTGTGACTCAAGAAAGATGAACACCCGATTTCTTGAGCTTCTTCTCAGTGGCTCTCCCACGGAGATTCGGTTAAAAGACTGTTCTTGGTTGACGGAGGAGCAGTTTGCCAAATATTTTCAAACGTGTGACACTACAAGATTGGAGGTGCTGCAGCTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGGTACTTTGAGACAGTCACCAAGGTGGTTGCCAAAGTTAATTACACTGTCCCTCAGTGGTGCGTGCCGTCTGTCAGATAAGGGGTTGCATGTGCTAGCTTCTTCTGCCCCAGCACTGAGATCCATTAATCTAAGCCAGTGCTCCCTTCTCTCATCTGCCAGTATTAATATTTTGGCTGATTCATTGGGATCCCTTCTGAAAGAGTTATATCTTGATGATTGTCTTATGATTGATGCTGCACAAATTGTGCCAGGACTGAAGAAACTTAAACATTTAGAGGTGTTGTCATTGGCTGGCATTCAAACTGTCTCTGATGAATTTATCAAGGACTACATCATTGAATGTGGTCACAACATGAAGGAGCTTATTTTAAAAGACTGTCGAAAATTGACTGATGCATCGATTAAAGGCGTTGCTGAACACTGTCCTGGATTGTGTGCACTTGATCTTATGAACTTGGACAAATTGACAGATTTATCCTTAGGATATCTTACAAATAGTTGTCGAGCACTTCATACATTGAAGCTCTGCCGCAATCCATTCAGTGATGAAGCAATTGCTGCCTTCTTGGAGATTACTGGAGTGTCCTTGAAAGAACTTTCACTTAATAATATTAAGAAGGTTGGCCACCACACAACCTTATCACTTGCTAGGCATGCAAAAAATTTGCATATTCTAGATCTATCTTGGTGCCGGAATTTGACAGACAATGAGTTGGGTTTCATTGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAAATTTTTGGATGCTCACTGGTGACAGATGTTTTTCTGAATGGGCACTCAAACCCAGAGATTCAGATCCTTGGATTGAAGATGTCTCCTTTATTGCAAAATGTCAAAGTGCCCGAACCCTGTCAAGGTCCTCTGCGTTATTCACCAGTTTCAGTAGATTTGGTATAA 1302 0.4263 MKKKVCDAWVPKRNQKGGEKGFFFVPSLQELCLEMLADNADAMVSLEGVPDELIRKLCNLLCDSRKMNTRFLELLLSGSPTEIRLKDCSWLTEEQFAKYFQTCDTTRLEVLQLDQCGRCIPDYALLGTLRQSPRWLPKLITLSLSGACRLSDKGLHVLASSAPALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAAQIVPGLKKLKHLEVLSLAGIQTVSDEFIKDYIIECGHNMKELILKDCRKLTDASIKGVAEHCPGLCALDLMNLDKLTDLSLGYLTNSCRALHTLKLCRNPFSDEAIAAFLEITGVSLKELSLNNIKKVGHHTTLSLARHAKNLHILDLSWCRNLTDNELGFIVDSCFSLRLLKIFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQNVKVPEPCQGPLRYSPVSVDLV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0799 433 PANTHER UNCHARACTERIZED 8 426 - -
Gso13g0799 433 Gene3D Ribonuclease Inhibitor 16 319 IPR032675 -
Gso13g0799 433 SMART LRR_CC_2 162 187 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 346 371 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 136 161 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 320 345 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 268 293 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 294 318 IPR006553 -
Gso13g0799 433 SMART LRR_CC_2 242 267 IPR006553 -
Gso13g0799 433 Gene3D Ribonuclease Inhibitor 320 414 IPR032675 -
Gso13g0799 433 PANTHER F-BOX/LRR PROTEIN 8 426 - -
Gso13g0799 433 SUPERFAMILY RNI-like 80 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0799 Gso-Chr13 22315879 22319143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0799 K15082 - gmx:100798274 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0799 13 22315879 22319143 Gso17g0412 17 3764481 3769010 GST
Gso13g0799 13 22315879 22319143 Gso15g1467 15 16918129 16924310 PCT
Gso15g1467 15 16918129 16924310 Gso13g0799 13 22315879 22319143 PCT