Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1467 ATGGTCCAAACCAGAACAACAACCCCTAAGCCCTCGAAACCCGAAGCCATTCACCCCCTCACCCCCTCCCAAACTCACGAACCTTCTTCCTCCGCCTCCGCCTCTCTACCCCTCCGCCGCCACAGCCTCCGCCTCGCCCCCGCTAGGGTTTCCACCGCCAACCGGAACCCAACCGGCTACCAGCGTGAGGGCTTTCTCAACCTAAGATCGGGAAAGAAGATTCTCAAGAGAACAATGACAAAAGCGGAAAACTCAGTAGAAAAGAATGAGGACGTGGCAGTGGCGGTTGACGGTAATGTGGTAACGCCAGAATCCAAAGCGGAGAACTCATGCGTCAATGTCTTCAACATTATAGCAGATGATTCTGACTCCGACAACGGCCACGATGCAATCCCTGATTTCGCCGTTAGGGTTTCCACTGGCAACCTCAAGCGCAGGAGCGACTCTGCCGGTTCCCAACGTGAGGACTTTCTCTGCTTAAGATCGAGAAAGAATTTAGAAGAACAGGGTAATGATAAGGCAAATGAAGATGACTCAGTGAAGATAAATGATGACGTGGCTGCGGCGGTTGTTGATTGCGATGTGATAACACCGGAATCCAAAGCGGAAAACTCAGGATTCAATTTAAACCTTATAGCAGTTAACTCTGACTCCGACTCCGCTTTTAGGGTTTCCACCGGCAACCGGAAGCGCAAGATTCACTCAACCGGTTCCGGATGCGAGGGTTTTCTCAACAAAAGACCGGGGAAGAAGGCTGTCAAGAGAGCAATGACAAACGATTCAGAAGAACAAAGCAATAATAACGCAAATGATGATGATGATAATGACGTGGCGGTGGCGGTTGATGAAAATGTGATGATGCCAGAGAACACTGGTGGTGCAAACGTTGTAGCGGATAATAGTGTACCTTTGCGTGTTCGAGAACGTCCTAGAAATTCCAATGCAAGAGAGCGTGGTTCCGGTTATGGGAGGAACGATTACATGGAACGCTTCCACGACATAGCCCGGGAAAACGCGTCGCGGTTTGCTTTCTTTGCACCGGAAGAGGAGGACCATGACCGGTCACCGCCGGTGGAACCGGAGCGTGACGAAATCGAGGATTGGCCCGGTCCTTTCTCCACAGCTATGAAAATCATCAGAGACCGAGGGTCGAAACTGCAAAACGCTGAAGCGAGTTCGCAAGCGAGCTTGTGTGAGTCTATTAAGTGGGTTCCTAATGCGAAGAGAGGGAATGCAGGTGTTAATGTTTCGGTTCCGTCGTTGCAAGAGATGTGCCTTAAGATTCTGGTGAAGAATGTTGATGCTATTGCTTCGCTTGAGAGTGTGCCTGATGCCCTGAGGCACCGGCTTAGCCAGTTGCTCTGTGACTCGAGGAGAATTAACGGCCACTTTCTCGAGCTTCTTGTGCGTGGAACGCCCACTGAGATTCGATTGAGAGATTGCTCGTGGTTAACGGAGGAACAGTTTACCGAGTGTTTTCGAACGTGTGACACGGAAAATTTGGTGGTACTGCAACTTGACCAGTGTGGGCGCTGTTTGCCTGATTATGTAGTAGTTTCTACTTTGGCACAGTCGCCAAGGCATTTATCTAGTTTATCTACTCTATCCCTCAGTGGTGCATGCCGACTTTCAGATGGAGGTTTGCGTGCACTTGTTTCTTCTGCTCCGGCACTTAGATCCATAAATCTCAGCCAGTGTTCCCTTCTCACATCTTCTAGTGTATATATTTTGGCTGAATCATTAAAATCTCTTCTGAAAGAGTTGTACCTTGATGATTGCCAAGGCATTGATGCTGCACTAATTGTGCCAGCACTAATTGAGCTTGAACATTTAGAAGTGTTGTCAGTAGCTGGCATTCAAACGGTTTGTGATGAATTTGTCAAGAACTACATTGTTGCTCGTGGACAAAACATGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACTGATGCATCAATCAAAGCCATTGTTGAGCACTGTCCAGGATTATGTGTGCTTGATCTTATGAACCTGCACAAATTAACAGATTTATCTATAGGACATCTTGCAAATGGTTGTCGTGCACTTCATACACTGAAACTTTGCCGTAACCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACCACCGGAGGGTCCTTAAAAGAATTGTCACTTAACAACATTAAGAAGGTTGGTTACCACACAACCTTATCACTTGCAAACCATGCAAAAAATTTGCATTCTCTAGATTTATCTTGGTGCAGAAATTTGACAGACAATGCACTGGGTTTGATTGTGGATAGCTGTTTGGCACTGAGGTCACTTAAACTTTTTGGATGCAGTCAGGTAACAGATGCTTTTCTCAATGGCCACTCAAACCTTCAGATCCAGATAATTGGTTTGAAAATGTCTCCTGTGTTGGAACATGTCAAAGTGCCAGATCCTCATCAAGGTGCTTTGAATTATTCATCAGTCTCCGTAGATTTGGTATAA 2481 0.4676 MVQTRTTTPKPSKPEAIHPLTPSQTHEPSSSASASLPLRRHSLRLAPARVSTANRNPTGYQREGFLNLRSGKKILKRTMTKAENSVEKNEDVAVAVDGNVVTPESKAENSCVNVFNIIADDSDSDNGHDAIPDFAVRVSTGNLKRRSDSAGSQREDFLCLRSRKNLEEQGNDKANEDDSVKINDDVAAAVVDCDVITPESKAENSGFNLNLIAVNSDSDSAFRVSTGNRKRKIHSTGSGCEGFLNKRPGKKAVKRAMTNDSEEQSNNNANDDDDNDVAVAVDENVMMPENTGGANVVADNSVPLRVRERPRNSNARERGSGYGRNDYMERFHDIARENASRFAFFAPEEEDHDRSPPVEPERDEIEDWPGPFSTAMKIIRDRGSKLQNAEASSQASLCESIKWVPNAKRGNAGVNVSVPSLQEMCLKILVKNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRTCDTENLVVLQLDQCGRCLPDYVVVSTLAQSPRHLSSLSTLSLSGACRLSDGGLRALVSSAPALRSINLSQCSLLTSSSVYILAESLKSLLKELYLDDCQGIDAALIVPALIELEHLEVLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDASIKAIVEHCPGLCVLDLMNLHKLTDLSIGHLANGCRALHTLKLCRNPFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRSLKLFGCSQVTDAFLNGHSNLQIQIIGLKMSPVLEHVKVPDPHQGALNYSSVSVDLV* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1467 826 PANTHER F-BOX/LRR PROTEIN 97 820 - -
Gso15g1467 826 MobiDBLite consensus disorder prediction 1 36 - -
Gso15g1467 826 MobiDBLite consensus disorder prediction 347 368 - -
Gso15g1467 826 MobiDBLite consensus disorder prediction 256 275 - -
Gso15g1467 826 Gene3D Ribonuclease Inhibitor 631 821 IPR032675 -
Gso15g1467 826 MobiDBLite consensus disorder prediction 18 36 - -
Gso15g1467 826 Gene3D Ribonuclease Inhibitor 416 630 IPR032675 -
Gso15g1467 826 PANTHER UNCHARACTERIZED 97 820 - -
Gso15g1467 826 SMART LRR_CC_2 661 686 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 765 790 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 529 554 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 635 660 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 739 764 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 687 711 IPR006553 -
Gso15g1467 826 SMART LRR_CC_2 555 580 IPR006553 -
Gso15g1467 826 SUPERFAMILY RNI-like 477 782 - -
Gso15g1467 826 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1467 Gso-Chr15 16918129 16924310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1467 K15082 - gmx:100808150 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0799 13 22315879 22319143 Gso15g1467 15 16918129 16924310 PCT
Gso17g0412 17 3764481 3769010 Gso15g1467 15 16918129 16924310 PCT
Gso15g1467 15 16918129 16924310 Gso13g0799 13 22315879 22319143 PCT
Gso15g1467 15 16918129 16924310 Gso17g0412 17 3764481 3769010 PCT