Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0341 ATGAAGCAAAAAACGCCTTCTTCACCAACCACTGCAAGAAATGCGTCGAAGATGCAAGGTGACAAGTCCCTGCAGAGTCCTCCACCACCACCACCACCACGCCTCAGAGCTTCTTCTAAGGCTCCGAAGTCACCGCCAGAGATTGTAAATAGGGAATCCATTTCATCAACCAGAGCTAAATCAGTGCCTCCAGACTTGAAGAACGTTTCAAGGGCCAAAAGGGGTGTTGTGGTGAACAAGCCTAAGTTGAATGAAGAGGCTAAGGTTGTTGTTGTTGCTAGGCCACGGCGGAGGGTTGGGGATTTTGATCTGCAAAAGAATGAAGACGATGATCCTGATGGGAAGAAGAAGAAGGAGTTGCAGGAGAAGCTAGAGGTGAGTGAGAATTTGATCAAGAGTTTGCAATCTGAGGTGCTTGCATTGAGGGAGGAATTGGATAGAGTTAAGAGCTTGAATGTGGAGCTTGAGTCTCGGAACACAAAGCTCACTCAGAATCTTGCTGCTGCTGAAGCTAAGATATCAACTGTTGACATTGGCAACAATGGAAAGAAGGGGCCAATTGGAGAACACCAGAGTCCCAAATTTAAAGATATACAGAAACTCATTGCTGAAAAATTGGAACGGTCTAGAGTGAAAAAGGAAGGTACTCCTGAAATAATTTTTGCTAAAGCATCAATCTCAGCTCCAACACCAAGTTATGCCATTCCTGAAACTACAAGTATAGGAAGAAAATCTCCACCCAATACATGCCTGCAGCCACCGCCACCAGTTACTAGTGTAGGAAGAAAATCTCCATCCAACACATGCCTGCAGCCACCTCCACCACCGCCAATTCCGACTCGGCCTTTGGCAAGATTAGCCAATTCCCAAAAGTCCCCTGCAATTGTTGAACTATTTCACTCCTTAAAGAATAAGGATTGGAAGATAGACTCAAAAGGATCAGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTTGGAGAAATTCAGAACCGTTCAGCTCATCTTTTAGCAATAAGGGCAGACATTGAAACAAAAGGAGAATTCATTAATGACCTTATAAGAAAAGTAGTAGATGCAGCCTTCACGGATATTGAAGAGGTCCTAAAGTTTGTTGATTGGCTTGATGTCAAATTATCATCATTGGCTGATGAGCGTGCCGTCTTGAAGCCTTTTAAGTGGCCTGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCATGAGCTTAAAATGCTAGAACAAGAGATTTCCTCCTACAAGGATGACCCTGACATTCCATGTGGAGCTGCCTTAAAAAAGATGGCCAGCCTATTAGACAAGTCTGAGCGGAGCATACAAAGGCTAATCAAGCTACGAAGTTCAGTCACACATTCATATCAAATGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAGCGAGATAAAGCAGGCTTCCATGACTCTGGTCAAGACATACATGAAAAGAGTGACAATGGAGCTTGAATCCATTCGGAATTCAGACAGAGAATCCATTCAAGATTCTCTTCTGCTTCAGGGCATGCATTTTGCATATAGGGCTCATCAGTTTACTGGAGGTTTGGACTCAGAAACAATGTGTGCTTTTGAAGAGATAAGACAACGTGTACCAGGACACCTAGCAGGGTCTCGAGAACTTTTGGCCGGCATACCATAA 1704 0.4384 MKQKTPSSPTTARNASKMQGDKSLQSPPPPPPPRLRASSKAPKSPPEIVNRESISSTRAKSVPPDLKNVSRAKRGVVVNKPKLNEEAKVVVVARPRRRVGDFDLQKNEDDDPDGKKKKELQEKLEVSENLIKSLQSEVLALREELDRVKSLNVELESRNTKLTQNLAAAEAKISTVDIGNNGKKGPIGEHQSPKFKDIQKLIAEKLERSRVKKEGTPEIIFAKASISAPTPSYAIPETTSIGRKSPPNTCLQPPPPVTSVGRKSPSNTCLQPPPPPPIPTRPLARLANSQKSPAIVELFHSLKNKDWKIDSKGSVNHQRPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIRKVVDAAFTDIEEVLKFVDWLDVKLSSLADERAVLKPFKWPEKKADAMREAAVEYHELKMLEQEISSYKDDPDIPCGAALKKMASLLDKSERSIQRLIKLRSSVTHSYQMYNIPTAWMLDSGIMSEIKQASMTLVKTYMKRVTMELESIRNSDRESIQDSLLLQGMHFAYRAHQFTGGLDSETMCAFEEIRQRVPGHLAGSRELLAGIP* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0341 567 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 567 IPR040265 -
Gso17g0341 567 MobiDBLite consensus disorder prediction 24 39 - -
Gso17g0341 567 PANTHER F11A17.16 1 567 - -
Gso17g0341 567 Coils Coil 117 172 - -
Gso17g0341 567 MobiDBLite consensus disorder prediction 49 63 - -
Gso17g0341 567 MobiDBLite consensus disorder prediction 255 279 - -
Gso17g0341 567 MobiDBLite consensus disorder prediction 1 75 - -
Gso17g0341 567 Coils Coil 402 422 - -
Gso17g0341 567 MobiDBLite consensus disorder prediction 1 23 - -
Gso17g0341 567 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0341 Gso-Chr17 3094627 3099237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0341 - - gmx:100820135 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0341 17 3094627 3099237 Gso17g0341 17 3094627 3099237 ECH
Gso13g0876 13 23048237 23057915 Gso17g0341 17 3094627 3099237 GST
Gso17g0341 17 3094627 3099237 Gso15g1538 15 19262055 19271102 PCT
Gso17g0341 17 3094627 3099237 Gso9g0670 9 8976117 8985186 PCT
Gso15g1538 15 19262055 19271102 Gso17g0341 17 3094627 3099237 PCT
Gso9g0670 9 8976117 8985186 Gso17g0341 17 3094627 3099237 PCT