Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0876 ATGAAGCAAAAAACGCCATCTTCACCGACCACTGCAAGAAGTGTCTTGAAGAAGCAAGGTCACAAGTCCCTGCAGAGTCCTCCACCACCACCACCACCACGCCTCAGAGCTTCTTCTAAGGCTCCAAAGTCACCGCCAGAGGTTGTAAACAGGGAATCCATTTCATCAACGAGAGCTGAGTCAGTGCCTCCAGACTTGAAGAACGTTTCAAGGGCTAAAAGGGGTGTCGTGGTGAACAAGCCTAAGTTGAATGAAGAGGTTTTGGGGTCTCAAAAAGCTGAAGAGGGTAAGATTGTTATTGTTGCTAGGCCACGGCGAAGGGTTGGGGATTTTGGTTCGAGGAAGAGTGAAGATGATGACTCTCATGGAAAGAAGAAGAAGGAGTTGTTGCAGGAGAAGCTTGAGGTGAGTGAGAATTTGATCAAGAGTTTGCAATCTGAGGTGCTGGCATTGAGGGAGGAATTGGATAGAGTTAAGAGCTTGAATGTGGAGCTTGAGTCTCAGAACACAAAGCTCACTCAGAATCTTGCTGCTGCTGAAGCTAAGATATCAAATGTTGGCATTGGCAACAATGGAAAGGAGCCAATTGGAGAACACCGGAGTCCCAAATTTAAAGATATACAGAAACTCATTGCTGAAAAATTGGAACGGTCTAGAGTAAAAAAGGAAGGTACTCCTGAAATAATTTTTGCTAAAGCATCAATCTCAGCTCCAACACCAAGTTATGCCGTTCCTGAAACTATAAGTGTAGGAAGAAAATCTCCACCCAATACATGCCTGCAGCCACCTCCACCGCCGCCACCACCAATTACAAGTGTAGGAAGAAATTCTCCATCCAACACATGCCTGCAGCCGCCACCGCCACCGCCGCCACCGCCAATTCCAACTCCGCCTTTGGCAAGATTAGCTAACACCCAAAAGGCCCCTACCATTGTTGAACTATTTCACTCCTTAAAGAATAAGGATGGGAAGATAGACTCAAAAGGATCAGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTTGGAGAAATTCAGAACCGTTCAGCTCATCTTCTAGCAATAAGGGCAGACATTGAAACAAAAGGAGAATTCATTAATGACCTTATTAAAAAAGTAGTAGATGCAGCCTTCACGGATATTGAAGAGGTCCTAAAGTTTGTTGATTGGCTTGATGGCAAATTATCATCATTGGCTGATGAGTGTGCCGTCTTGAAGCATTTTAAGTGGCCAGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCATGAGCTTAAAATGTTAGAACAGGAGATTTCTTCCTACAAGGATGACCCTGACATTCCATGCGGAGCTGCCTTAAAAAAGATGGCCAGCCTATTAGACAAGTCTGAGCGGAGCATACAGAGGCTAATCAAGCTACGGAGTTCAGTCACACATTCATATCAAATGTACAACATTCCAACAGCATGGATGCTTGATTCTGGAATAATGAGCAAGACGAGTAACATACCATCGATGCAGATAAAGCAGGCTTCCATGACTCTGGTCAAGACGTACATGAAAAGAGTGACAATGGAGCTTGAATCCATTCGGAATTCAGACAGAGAATCCATTCAAGATTCTCTTCTGCTTCAGGGCGTGCATTTTGCATATAGGGCTCATCAGTTTACTGGAGGATTAGACTCAGAAACAATGTGTGCTTTTGAAGAGATAAGGCAACGTGTACCAGGAAACCTAACAGGGTCTCGAGAACTTTTGGCTGGCATACCATAA 1776 0.4443 MKQKTPSSPTTARSVLKKQGHKSLQSPPPPPPPRLRASSKAPKSPPEVVNRESISSTRAESVPPDLKNVSRAKRGVVVNKPKLNEEVLGSQKAEEGKIVIVARPRRRVGDFGSRKSEDDDSHGKKKKELLQEKLEVSENLIKSLQSEVLALREELDRVKSLNVELESQNTKLTQNLAAAEAKISNVGIGNNGKEPIGEHRSPKFKDIQKLIAEKLERSRVKKEGTPEIIFAKASISAPTPSYAVPETISVGRKSPPNTCLQPPPPPPPPITSVGRNSPSNTCLQPPPPPPPPPIPTPPLARLANTQKAPTIVELFHSLKNKDGKIDSKGSVNHQRPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIKKVVDAAFTDIEEVLKFVDWLDGKLSSLADECAVLKHFKWPEKKADAMREAAVEYHELKMLEQEISSYKDDPDIPCGAALKKMASLLDKSERSIQRLIKLRSSVTHSYQMYNIPTAWMLDSGIMSKTSNIPSMQIKQASMTLVKTYMKRVTMELESIRNSDRESIQDSLLLQGVHFAYRAHQFTGGLDSETMCAFEEIRQRVPGNLTGSRELLAGIP* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0876 591 MobiDBLite consensus disorder prediction 257 273 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 24 39 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 246 301 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 1 84 - -
Gso13g0876 591 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 274 591 IPR040265 -
Gso13g0876 591 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 271 IPR040265 -
Gso13g0876 591 Coils Coil 127 182 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 1 21 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 49 63 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 103 130 - -
Gso13g0876 591 PANTHER F11A17.16 274 591 - -
Gso13g0876 591 PANTHER F11A17.16 1 271 - -
Gso13g0876 591 Coils Coil 418 438 - -
Gso13g0876 591 MobiDBLite consensus disorder prediction 281 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0876 Gso-Chr13 23048237 23057915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0876 - - gmx:100798183 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0876 13 23048237 23057915 Gso17g0341 17 3094627 3099237 GST
Gso13g0876 13 23048237 23057915 Gso15g1538 15 19262055 19271102 PCT
Gso13g0876 13 23048237 23057915 Gso9g0670 9 8976117 8985186 PCT
Gso15g1538 15 19262055 19271102 Gso13g0876 13 23048237 23057915 PCT
Gso9g0670 9 8976117 8985186 Gso13g0876 13 23048237 23057915 PCT