Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1538 ATGAAACATCTTGCAATGATACGAGGCTTGGCAAACTTTCATGTGAGTAATAATCCCCACATATCTGCTAGTGAAAACATCCTGCAAATCAAATTCCACTTACACTCAACCAGCATAGGAACCATGAAACAAGAGCCACTGGCATCACCAACGACATCGTCACTACCACAACCAACAATAACAACAAAAAATGTGATCAAGATTCAGAACAGTTTGACTCCATCACGGTTAAGACTTCCTTCCAAGTACAGAGAGCCTCCAAAGACTCCACCAGAGGTTGTCAACAATGGGATGGTGTCAACGCCATTGAGGAGAGCCAAGTCCGTAACTCCAGAGTTGAAGCACAATTCAAGGATCAAAAAGGGTCTTGTGCTGAACAAGGCCAAACCCAATGAAGAGGTTTTGGGAACAACGCAAAGGGGTAGGGAAGTTGAAGAGGCTAAGGTTGTTTCTCGTTTCGTTAGGCCTCATGCTGTGGAACAGTTTTCAAGGCCAAGAAGTGGAGTTGGAGATTTTGCTTTTAAGAGGGATAAGGAGGACCCTGATGGGAAGAGTAAGAAGGAATTGATGGAGAAGCTCGAGGCGAGTGAGAGTTTGATAAAGAATCTGCAGTCTGAAGTGCTGGCTCTGAAGGCTGAATTGGAGAAAGTTAAGGGCTTGAATGTGGAGCTTGAGTCTAACAACAGGAAACTCACTGAGGATCTTGCTGCTGCTGAAGCAAAGGTGGTGTCTTTGAGTGGCAATGAGAAGGAGCCAAATGGAGAACATCAGAGCCCCAAGTTTAAACTCATTCAGAAACTCATTGCTGACAAATTAGAAAGGTCCATAGTGAAAAAGGAATCCATTACTAATGGAGGCTTTGTTAAAGCATCAATTCCAGCACAAACTGCAATTCCTGAGGTCACAACTACGAGGACAGGAAGAAAACCTACATGCAACTCGTGCCTGCCACCACCTCCACCACCGATGCCACCATCAATCCCTTCTAGGCCTATAGCAAAAGCGAATAACACTCAAAGGGCCCCAGCATTTGTGAAATTATTTCACACATTAAAGAATCAAGAAGGGATGAAAAGCACAACGGGGTCAGGTAAACAGCAGAGACCAGTAGCTGTCAATGTACACAGCAGCATTGTTGGAGAAATTCAAAACCGTTCTGCTCATCTTTTAGCAATAAGGGCAGACATTGAAACTAAAGGAGAGTTTATTAATGACCTTATAAAAAAGGTGGTAGAAGCGGCCTACACAGATATCGAAGATGTCTTAAATTTTGTTAATTGGCTTGATGGTGAACTCTCATCATTGGCTGATGAGCGTGCAGTCTTGAAGCATTTTAATTGGCCCGAGAGGAAAGCTGATGCCATACGTGAAGCTGCAGTTGAGTATCGCGAACTTAAATCATTAGAGCAAGAGATTTCCTCCTTCAAGGATGACCCAGAAATTCCATGTGGAGCTTCCTTGAGAAAGATGGCTAGCCTATTAGACAAGTCTGAGAGCAGCATACAGAGGCTAATCAAGTTGCGAAATTCTGCAATGCGTTCATACCAAGAGTACAAAATTCCAACTGCTTGGATGCTTGATTCAGGAATCATGACCAAGATAAAGCAGGCTTCTATGACTCTGGTCAAGATGTATATGAAAAGAGTGACAATGGAGCTTGGATCAGCTCGGAACTCAGACAGACAGTCTAGCCAAGAATCCCTTCTTCTCCAGGGCATGCATTTTGCATATAGAGCTCATCAGTTTGCTGGTGGTCTAGATGCAGAAACTTTGTGTGCTTTTGAAGAGATAAGGCAACATGTACCAGCACACTTGGCAGGTTCTCGGGAACTTTTGGCTGGCATAGCATCATCATGA 1857 0.4383 MKHLAMIRGLANFHVSNNPHISASENILQIKFHLHSTSIGTMKQEPLASPTTSSLPQPTITTKNVIKIQNSLTPSRLRLPSKYREPPKTPPEVVNNGMVSTPLRRAKSVTPELKHNSRIKKGLVLNKAKPNEEVLGTTQRGREVEEAKVVSRFVRPHAVEQFSRPRSGVGDFAFKRDKEDPDGKSKKELMEKLEASESLIKNLQSEVLALKAELEKVKGLNVELESNNRKLTEDLAAAEAKVVSLSGNEKEPNGEHQSPKFKLIQKLIADKLERSIVKKESITNGGFVKASIPAQTAIPEVTTTRTGRKPTCNSCLPPPPPPMPPSIPSRPIAKANNTQRAPAFVKLFHTLKNQEGMKSTTGSGKQQRPVAVNVHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIKKVVEAAYTDIEDVLNFVNWLDGELSSLADERAVLKHFNWPERKADAIREAAVEYRELKSLEQEISSFKDDPEIPCGASLRKMASLLDKSESSIQRLIKLRNSAMRSYQEYKIPTAWMLDSGIMTKIKQASMTLVKMYMKRVTMELGSARNSDRQSSQESLLLQGMHFAYRAHQFAGGLDAETLCAFEEIRQHVPAHLAGSRELLAGIASS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1538 618 PANTHER F11A17.16 51 618 - -
Gso15g1538 618 Coils Coil 451 478 - -
Gso15g1538 618 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 51 618 IPR040265 -
Gso15g1538 618 Coils Coil 186 248 - -
Gso15g1538 618 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1538 Gso-Chr15 19262055 19271102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1538 - - gmx:100820086 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1538 15 19262055 19271102 Gso9g0670 9 8976117 8985186 GST
Gso13g0876 13 23048237 23057915 Gso15g1538 15 19262055 19271102 PCT
Gso17g0341 17 3094627 3099237 Gso15g1538 15 19262055 19271102 PCT
Gso15g1538 15 19262055 19271102 Gso13g0876 13 23048237 23057915 PCT
Gso15g1538 15 19262055 19271102 Gso17g0341 17 3094627 3099237 PCT