Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0337 ATGTACGCGGCAGAGGTTTTCCGCGTCTTCGCCGTGCGCGGCGGCAACGCTTCTCCGGCGGTGGCTCCCACCACCAACTGCTTAAAAATCGCAGCTTTCAGCACACCCACTTTCCGTAACAGCGTGAATGCGAGGTGGGCGAAGGCTTTGACGCTCTGTCGCTGCAGTGTTGACTCAAAGTCCTCCGTCGGCGACGAAGTTTTCTCGGTGACTCAGTCGAACAAGTCCGACGTGGACTACCTCGGAGAGAGCACCAAAGGTGATTTGAACGTCAAGTTGGAGCATCTTGAGGCTTTTGGAATTGATGGTCATGCTTCATTAGATGGTCCAATTGAGGAAGTGGCTAGATCAGAGGCAAGAAAAGCTGAGGATTTGCTACAAGACTTGGGCATTCCGAGCCCTTCTTCATCGAGAAATTCGCCTCGTGGAATATTCTGCAGCCGTACATTGAATTTGCGGTCCATTAGTGCCATTGGATATGACATGGACTATACCTTGATCCATTATAATGTGATGGCTTGGGAAGGGAGGGCTTATGACTACTGTATGGAAAACCTTAAGAATATGGGTTTCCCTGTTGATGGACTTGCCTTTGATCCTGACCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAAAGGCAATTTGGTTAAAGCTGATCGATTTGGTTACATAAAAAGAGCTATGCATGGTACCAAAATGTTATCTACTCGAGCTGTTAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGAACTATACCGGCAGATCTTGCTCTTGATTATAAAGGGCTATATAAGGCTGTTGGAAAAGCTCTCTTCTGGGCACATGTTGAAGGTCGCCTTAAGAGTGAGATCATGTCTAAGCCTGAACTGTTTGTGGAGCCTGATCCAGAATTACCTTTGGCACTTTTGGATCAGAAGGAGGCTGGCAAAAAACTTCTACTAATTACCAACTCAGATTATCTTTACACAGACAAAATGATGCGGCATTCTTTTAATAGATTCCTTCCCAACGATATGGGTTGGCGAGATCTATTTGACATTGTAATAGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACATCACATCCCATGTATGAAGTGGTCACAGGCGAGGGCCTTCTGCGTCCATGCTTCAAAGCTCAAACTGGTGGTTTGTACTCAGGGGGAAGTGCACAAATGGTTGAAAATTCCCTAGATATTCATGGAGATGAAATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCAAAAGTCCATCTGCGATGGCGAACAGCATTGATTTGTCGAGAACTGGAAGAAGAGTACAGTGCCTTGATTGGTAGCCGTGGTTATAGAGAATCATTGGTGGAGCTTATTAGTCAAAAGGAGGTTGTAGGGGATCTCTTTAATCAACTTCGGCTGGCTCTGCAGAGGCGAAGTAAAGACCGTCCTGCTCAAACCCTAGCAGCAACTAATCTGGATGATGAAGACCTCACTGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATGAGAAAATTGCTCCAATGCTGGAGGCAGATGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGGCTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCTGATATTTATACATCTAGGGTGTCAAATTTTTTGTATTATACACCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCATACACATACTATTGTTCACAACTTTATAATGAGAATTCTTCCTAG 1878 0.4489 MYAAEVFRVFAVRGGNASPAVAPTTNCLKIAAFSTPTFRNSVNARWAKALTLCRCSVDSKSSVGDEVFSVTQSNKSDVDYLGESTKGDLNVKLEHLEAFGIDGHASLDGPIEEVARSEARKAEDLLQDLGIPSPSSSRNSPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVMAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPADLALDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYLYTDKMMRHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGEGLLRPCFKAQTGGLYSGGSAQMVENSLDIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYSALIGSRGYRESLVELISQKEVVGDLFNQLRLALQRRSKDRPAQTLAATNLDDEDLTDSMQKLLIVMQRLDEKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTYYCSQLYNENSS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0337 625 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 60 618 IPR008380 -
Gso17g0337 625 SUPERFAMILY HAD-like 141 612 IPR036412 -
Gso17g0337 625 CDD HAD_cN-II 145 466 - -
Gso17g0337 625 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 144 483 IPR008380 -
Gso17g0337 625 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 60 618 - -
Gso17g0337 625 Pfam 5' nucleotidase family 144 611 IPR008380 -
Gso17g0337 625 Gene3D - 306 493 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0337 Gso-Chr17 3033125 3040056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0337 - - gmx:100815862 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0337 17 3033125 3040056 Gso17g0337 17 3033125 3040056 ECH
Gso13g0882 13 23119062 23126058 Gso17g0337 17 3033125 3040056 GST
Gso17g0337 17 3033125 3040056 Gso15g1541 15 19499130 19511392 PCT
Gso15g1541 15 19499130 19511392 Gso17g0337 17 3033125 3040056 PCT