Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1541 ATGGCTTTAAGAGGAATTGATGTACATGCTGCATTTGAAGGTCCAGTTGAGGAGGCCAGAACAGAGGCTAGAAAAGCTGAAGATTTACTGAAAAAATTGGATATTCCGAGTCCTTCGTTGAGAAATTCACCTCGTGGAATATTCTGCACCCGAACGCTGAATCTAAGGTCAATTAGTGCTATTGGATATGACATGGACTATACCTTGGTGCATTATAATGTGAAGGCTTGGGAAGGGCGTGCTTATGACTACTGTATGGAAAACCTCAAGAATATGGGTTTCCCTATTGATGGACTTGCGTTTGATCCAGACCTGGTTATCAGAGGTCTTGTGATAGATAAAGAGGGAGGCAATTTGGTTAAAGCTGATCGATTTGGTTATATAAAAATAGCCATGCATGGAACCAAAATGCTATCTACGCGTGCTGTGAGTGAGATCTATGGGAGAGAACTGGTGGACCTGCGGCAAAAGAGTCGATGGGAGTTTCTCAACACATTCTTCTCTGTGTCCGAAGCTGTGGCTTACATGCAGATGGTTGACAAACTTGATGGTGGGATTATACCATCCAATCTTGGCTCCTTTGATTATAACGGGCTTTATAAGGTTGTTGGAAAAGCTCTCATCGCGGCACACGTAGAAGGCCGCCTCAAGAGTGAGATTATGTCTAACCCTGAACAGTTTGTGGAGCCTGATCCGGAATTACTCTTCACACTTTTGGATCAGAAAGAGGCAGGCAAAAAACTTGTACTTATTACCAACTCAGATTATCATTATACACACAAAATGATGCATCATTCATTCAATAGATTCCTTCCCAATGACATGGGTTGGAGAGATTTATTTGACATTGTAATTGTCTCGGCAAACAAACCAGAATTCTTCCAAATGTCACACCCCATGTATGAGGTGGTGACAGAAGAGGGCCTGATGCGTCCATGCTTTAAGGCTCAAACTGGTGGTTTGTACTCAGGGGGGAGTGCGCAGATGGTTGAAAGTTCCCTAAATATACATGGAGATGAGATACTGTATATTGGAGACCATATTTACACTGATGTTAGTCAACCCAAAGTCCATTTGCGATGGCGAGCAGCATTGATTTGTCGGGAACTGGAAGAAGAATACACTGCCCTAATTCGTAGCCGGGGTCGTAGACAATCATTGGTAGAGCTTATCAATCAAAAGGAGGTTGTTGTTGATCTCTTTAACCAACTGCGGCTGGCTCTGCAGAGGCAAAGTAAAGGGCGTCCAGCCCAAATTGTTGCTGCAACTAATGTGAACAAAGAAAATCTTACTGAACGCATGCAAAAGTTACTTCTTGTTATGCAAATACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGGGAGCTCTTTAATAAAAAGTGGGGCTATCTATCGCGTGCTGGTTTGTGGGATAAAAGCCACTTGATGCGACAAATTGAGAAGTATGCAGATATATATACCTCTAGAGTGTCAAATTTTTTATATTACACACCGTTTATGTATTTTGGCTCTCAGGAACAGAACCTTGCACATGATTCATACACACACTATTGTTCTCAAATTGACAATTTTCCTTCCTATGGACAATTGGACCAACATGGTGGAGAAATACAAGAAACAAATGTATCTTGTTGA 1641 0.4193 MALRGIDVHAAFEGPVEEARTEARKAEDLLKKLDIPSPSLRNSPRGIFCTRTLNLRSISAIGYDMDYTLVHYNVKAWEGRAYDYCMENLKNMGFPIDGLAFDPDLVIRGLVIDKEGGNLVKADRFGYIKIAMHGTKMLSTRAVSEIYGRELVDLRQKSRWEFLNTFFSVSEAVAYMQMVDKLDGGIIPSNLGSFDYNGLYKVVGKALIAAHVEGRLKSEIMSNPEQFVEPDPELLFTLLDQKEAGKKLVLITNSDYHYTHKMMHHSFNRFLPNDMGWRDLFDIVIVSANKPEFFQMSHPMYEVVTEEGLMRPCFKAQTGGLYSGGSAQMVESSLNIHGDEILYIGDHIYTDVSQPKVHLRWRAALICRELEEEYTALIRSRGRRQSLVELINQKEVVVDLFNQLRLALQRQSKGRPAQIVAATNVNKENLTERMQKLLLVMQILDGKIAPMLEADGELFNKKWGYLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFGSQEQNLAHDSYTHYCSQIDNFPSYGQLDQHGGEIQETNVSC* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1541 546 Gene3D - 208 398 IPR023214 -
Gso15g1541 546 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 10 523 - -
Gso15g1541 546 Pfam 5' nucleotidase family 47 515 IPR008380 -
Gso15g1541 546 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 47 386 IPR008380 -
Gso15g1541 546 SUPERFAMILY HAD-like 44 516 IPR036412 -
Gso15g1541 546 CDD HAD_cN-II 48 370 - -
Gso15g1541 546 PIRSF NT5C2 27 543 IPR016695 -
Gso15g1541 546 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 10 523 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1541 Gso-Chr15 19499130 19511392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1541 - - vra:106778339 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0882 13 23119062 23126058 Gso15g1541 15 19499130 19511392 PCT
Gso17g0337 17 3033125 3040056 Gso15g1541 15 19499130 19511392 PCT
Gso15g1541 15 19499130 19511392 Gso13g0882 13 23119062 23126058 PCT
Gso15g1541 15 19499130 19511392 Gso17g0337 17 3033125 3040056 PCT