Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0882 ATGTACACGGCGGAGGTTTTCCGCGTCTTCGCCGTGCGCGGCGGCGACGCTTCGCCAGCAGTGGCCCCCGCCACCACCACCAATTGCTTAAAAATAGTAGCTTTCAACACACCCACTTTCCGTAACGGCTTGAATGCGAGGTGGGCGAAGGCGTTGACGCTCTGTCGCTGCAGCGTTGACTCAAAGTCCGTCGGCGACGAAGTTTTCTCGGTGACTCAGTCGAACAAGTCCGATGTGGACTACCTCGGGGAGAGCACCAAAGGTGATTTGAACGTCAAGTTGGAGCATCTTGAGGCTTTTGGAATTGATGGTCATGCTTCATTAGATGGTCCAATTGAGGAAGTTGCCAGATCAGAAGCAAGAGACGCTGAAGACTTGCTACAAGACTTGGGCATTCCGAGCCCTTCTTCATCCAGAAATTCGCCTCGTGGAATATTCTGCAGCCGTACATTGAATTTGCGGTCCATTAGTGCCATTGGATATGACATGGACTATACCTTGATCCATTATAATGTGATGGCTTGGGAAGGGAGGGCTTATGACTACTGTATGGAAAACCTTAAGAATATGGGTTTCCCTGTTGATGGACTTGCCTTTGATCCTGACCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAAAGGCAATTTGGTTAAAGCTGATCGATTTGGTTACATAAAAAGAGCTATGCATGGCACCAAAATGTTATCTACTCGAGCTGTTAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGAAACTATACCAGCAGATCTTGCTCTTGATTATAAAGGGCTATATAAGGCTGTTGGAAAAGCTCTCTTCTGGGCACATGTTGAAGGTCGTCTTAAGAGTGAGATCATGTCTAAGCCTGAACTATTTGTGGAGCCTGATCCAGAATTACCTTTGGCACTTTTGGATCAGAAGGAGGCTGGCAAGAAACTTCTGCTAATTACCAACTCAGATTATCTTTACACAGACAAAATGATGCAGCATTCTTTTAATAGATTCCTTCCCAACGATATGGGTTGGCGAGATCTATTTGACATTGTAATAGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACGTCACATCCCATGTATGAAGTGGTCACAGGCGAGGGCCTTATGCGTCCATGCTTCAAAGCTCAAACTGGTGGTTTGTACTCGGGGGGAAGTGCACAAATGGTTGAAAATTCCCTAGATATTCATGGAGATGAAATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCAAAAGTCCATCTGCGATGGCGAACAGCATTGATTTGTCGAGAACTGGAAGAAGAGTACGATGCCTTGATTGGTAGCCGCAGTTATAGAGAATCATTGGTGGAGCTTATTAATCAAAAGGAGATTGTAGGGGATCTCTTTAATCAACTTCGGCTGGCTCTGCAGAGGCGAAGCAAAGACCGTCCTGCTCAAACCCTAGCAGCAACTAACTTGAATGATGAAGACCTCACTGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATGAGAAAATTGCTCCAATGCTGGAGGCAGATGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCTGATATTTATACATCTAGGGTGTCAAATTTTTTGTATTATACACCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTAGCGCATGACTCATACACATACTATTGTTCACAACTCTATAATGAGAATTCTTCCTAG 1881 0.4482 MYTAEVFRVFAVRGGDASPAVAPATTTNCLKIVAFNTPTFRNGLNARWAKALTLCRCSVDSKSVGDEVFSVTQSNKSDVDYLGESTKGDLNVKLEHLEAFGIDGHASLDGPIEEVARSEARDAEDLLQDLGIPSPSSSRNSPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVMAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDETIPADLALDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYLYTDKMMQHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGEGLMRPCFKAQTGGLYSGGSAQMVENSLDIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYDALIGSRSYRESLVELINQKEIVGDLFNQLRLALQRRSKDRPAQTLAATNLNDEDLTDSMQKLLIVMQRLDEKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTYYCSQLYNENSS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0882 626 CDD HAD_cN-II 146 467 - -
Gso13g0882 626 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 62 619 - -
Gso13g0882 626 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 145 484 IPR008380 -
Gso13g0882 626 Pfam 5' nucleotidase family 145 612 IPR008380 -
Gso13g0882 626 SUPERFAMILY HAD-like 142 613 IPR036412 -
Gso13g0882 626 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 62 619 IPR008380 -
Gso13g0882 626 Gene3D - 307 494 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0882 Gso-Chr13 23119062 23126058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0882 - - gmx:100800826 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0882 13 23119062 23126058 Gso17g0337 17 3033125 3040056 GST
Gso13g0882 13 23119062 23126058 Gso15g1541 15 19499130 19511392 PCT
Gso15g1541 15 19499130 19511392 Gso13g0882 13 23119062 23126058 PCT