Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0182 ATGGAAAGCAGCCATAACATGAGGCAAAGCACCATGGAAACTGAGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTCTCTGAACTGTGTGGAGGTTTCAAGCTTCTATCGGACCCGGAAACTGGTTTGATCACGAGCGAGAGTCTAAGGACAAACTCAGCTCTTCTTGGCATGGAAGGGATGAGCAAGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGAGATGGAAAGCTTAATGAAACTGAGTTTTGCATCCTTATGGTGAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAGAAGGCAATTGATGAAGAGCTTAGGAAGTCATCATCTTAG 378 0.4683 MESSHNMRQSTMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEELRKSSS* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0182 125 SUPERFAMILY EF-hand 21 122 IPR011992 -
Gso16g0182 125 Gene3D - 13 125 - -
Gso16g0182 125 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Gso16g0182 125 Pfam EF-hand domain pair 47 99 IPR002048 GO:0005509
Gso16g0182 125 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Gso16g0182 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 - -
Gso16g0182 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0182 Gso-Chr16 2086048 2087294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0182 10 120 EF-hand Containing Proteins AT2G46600 74.775 9.65e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0182 K24345 - gmx:100802677 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0475 7 4719955 4721215 Gso16g0182 16 2086048 2087294 GST
Gso19g2170 19 50166081 50166770 Gso16g0182 16 2086048 2087294 PCT
Gso3g2210 3 47262476 47263331 Gso16g0182 16 2086048 2087294 PCT
Gso16g0182 16 2086048 2087294 Gso19g2170 19 50166081 50166770 PCT
Gso16g0182 16 2086048 2087294 Gso3g2210 3 47262476 47263331 PCT