Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0377 ATGACACCTTGGGCTGGGCAATTTCTGGCACAACACCCAAATTGCAATTCCATATATTGGTCTCTTGGCACAATGTTGTCGATTTTCCGGCAATACACGTTCGACGACTCGTTCTCGCAAGTGTTTGTGTCGGCGAAATTCCTGAAGGAGTACCAGATCGCCCTGACCTTCGCCAGCGACTACGACGACGAGGGTGCCCCCACCAACGGCGTTTTCCGACCGACCTGGGACCTGAGCAAGGTCACCCCCGAATCCATCGCGCGCTTCAAGGACAAGAACCCCAACGTTGACATCAAAGTCTTCATCAGCATCGGCAACCGCGGCACCCAACACCCCTTCAAACCCTTAAACAACAAAACCTGGATCGACAACGCCACCGAGTCCCTCACGCACCTCATCAAGAACGAAGACTACAACCTCCACGTGGACGGCATCGACGTGCTTTACGAGCACATCGATGCCTCCCCCGGTGACTTTATCGAGTGCGTGGGACAGCTCATAAGGAACCTCAAAGAAAAGGGCGTAGTGAGCGAGGCTTCTATTTCTCCCTCGTTTGCTCTGAACGAAGAATATTATCCCTTGTTGTACAGCGCTGTGTCCTTCTTCGTTGACTGGGTCGATTACCAGTTCCAAAGCGAGCTCAAACCAGTGTTCGACCCAACCACGTTGGTGAAGCGCTACAATGAACTAACCAAGCTTTATCCCAGAAGAAAACTCTTTGCTGGCTACAGCGCCGAGAACGAGGACTGGGCCACTCTGTCGCCGATCGTCTTCTTTCTCGGTGGCATGGACATTCTCAAGAAGAGAAAGGCTCCTGGAGTTTCCATTCATTACCATAATTACTATGCAGATGCTCCCAATAAGGACTGA 870 0.5184 MTPWAGQFLAQHPNCNSIYWSLGTMLSIFRQYTFDDSFSQVFVSAKFLKEYQIALTFASDYDDEGAPTNGVFRPTWDLSKVTPESIARFKDKNPNVDIKVFISIGNRGTQHPFKPLNNKTWIDNATESLTHLIKNEDYNLHVDGIDVLYEHIDASPGDFIECVGQLIRNLKEKGVVSEASISPSFALNEEYYPLLYSAVSFFVDWVDYQFQSELKPVFDPTTLVKRYNELTKLYPRRKLFAGYSAENEDWATLSPIVFFLGGMDILKKRKAPGVSIHYHNYYADAPNKD* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0377 289 Gene3D Glycosidases 26 287 - -
Gso15g0377 289 SUPERFAMILY (Trans)glycosidases 52 277 IPR017853 -
Gso15g0377 289 Pfam Glycosyl hydrolases family 18 85 255 IPR001223 GO:0005975
Gso15g0377 289 PRINTS 2-S globulin family signature 69 84 IPR000677 -
Gso15g0377 289 PRINTS 2-S globulin family signature 111 125 IPR000677 -
Gso15g0377 289 PRINTS 2-S globulin family signature 201 224 IPR000677 -
Gso15g0377 289 PANTHER CHITINASE 2-LIKE 23 287 - -
Gso15g0377 289 PANTHER RUBISCO-ASSOCIATED PROTEIN 23 287 - -
Gso15g0377 289 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 23 289 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0377 Gso-Chr15 3395990 3397080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0377 - - gmx:100776259 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0377 15 3395990 3397080 Gso11g3425 11 50203301 50204323 GST
Gso15g0377 15 3395990 3397080 Gso11g1233 11 11215343 11216448 PCT
Gso11g1233 11 11215343 11216448 Gso15g0377 15 3395990 3397080 PCT