Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3425 ATGATGTCCATATTCCGGCAATACACCTTGGACGACTCATTCTCGCAAGTGTTGGTGTCCCCGAAATTCCTGAAGGAGTACCAAATAGCCCTGACCTTCGCAAGCGACTACGACGACGACGGCGTCCCCACCAACGGGGTTTTCCGGCCAACCTGGGACCTAACCAAGGTGACCCCGGAATCAATCACGCGATTCAAGGATAAGAACCCCGACGTGGACATCAAAGTCTTCATCAGCATCGGCAACCGCGGCACCCAGCACCCCTTCAAACCCCTCAACAACCAAACCTGGATCCAGAACGCCACCATGTCCCTCACCAGCCTCATCAACAACCTCCACGTCGTCCACGGCATCGACGTCCTCTACGACCACATCGATGCCTCCCCCGCTGACTTTACCGAGTGCGTTGGCCAGCTCATTAGGAACCTCAAGGAAAACGGCGTCGTCTCCCAGGCTTCCATTTCTCCCTCGTCTTATCCCAACCAAGAATACTATCCGTTACTCTACAGCTCTGTGCCCTTCTTCGTTGACTGGGTCGATTACCAGTTCCAAAGCGAGGATCAACCCGTCTTGGAACCCACCACCTTGGTGAAGCGCTACAATGAATTAACCAAGGTTTATCCCAAAACAAAACTCTTTGCTGGCTACAGTGCTGAGAATGAGGACTGGGCCACAGTTTCCCCGTTCGTGTTCTTTTTGGGTGCCATGGACCTTCTCAAGAAGAGAAGTGCTCCTGGTGTTTCCATTCATTACCATAATTACTATGCATCAGAAGCTCCCAATAAGGACTGA 792 0.5227 MMSIFRQYTLDDSFSQVLVSPKFLKEYQIALTFASDYDDDGVPTNGVFRPTWDLTKVTPESITRFKDKNPDVDIKVFISIGNRGTQHPFKPLNNQTWIQNATMSLTSLINNLHVVHGIDVLYDHIDASPADFTECVGQLIRNLKENGVVSQASISPSSYPNQEYYPLLYSSVPFFVDWVDYQFQSEDQPVLEPTTLVKRYNELTKVYPKTKLFAGYSAENEDWATVSPFVFFLGAMDLLKKRSAPGVSIHYHNYYASEAPNKD* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3425 263 Pfam Glycosyl hydrolases family 18 61 228 IPR001223 GO:0005975
Gso11g3425 263 PANTHER RUBISCO-ASSOCIATED PROTEIN 1 261 - -
Gso11g3425 263 PANTHER CHITINASE 2-LIKE 1 261 - -
Gso11g3425 263 SUPERFAMILY (Trans)glycosidases 28 250 IPR017853 -
Gso11g3425 263 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 263 IPR001223 GO:0005975
Gso11g3425 263 Gene3D Glycosidases 2 262 - -
Gso11g3425 263 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Gso11g3425 263 PRINTS 2-S globulin family signature 87 101 IPR000677 -
Gso11g3425 263 PRINTS 2-S globulin family signature 174 197 IPR000677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3425 Gso-Chr11 50203301 50204323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3425 - - gmx:100819702 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0377 15 3395990 3397080 Gso11g3425 11 50203301 50204323 GST
Gso11g3425 11 50203301 50204323 Gso11g1233 11 11215343 11216448 PCT
Gso11g1233 11 11215343 11216448 Gso11g3425 11 50203301 50204323 PCT