Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0374 ATGTCGAGCTTACTTAATTCTTCTCTGAATGGGTCTGCTTCAAATCTTCCGGATGGTGCTGGGCGTTCTTTTGCTACGTCATTCTCTGGTTCTATTCAGGGATTGCACAACATTCATGGGAACTTTAATGTACCCAATATGCCCAGTACACTCACATCAAGAAACTCAACAATAAATAGTGTTCCAACTGGGGGAGGAGTTCAGCAACCTTCGGCAAGCCTTTCTAGTGGAAGATTTGCATCAAATAATCTACCTGTTGCTCTGTCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAGCAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAATAGTAGCACAAATGGAGTTGCTGGTCCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCCCGAATCACTAGTTCGATGGGAAACATGGTCGGTGGAGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCTGTTCCAGGTCTTGCTTCTCGTCTAAATTTAAGTGGAAACACTGGATCTGGTGGTTTAGGTGTGCAAGGACAAAATAGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCTGGAGGTCCGCTTTCACAAAGTCATGTTCAAACAGTAAATAACTTGAACTCTATGGGGATGCTGAATGATGTGAATTCCGGTGACAGTACACCTTTTGACATCAATGACTTTCCTCAACTGACCAGTCGTCCTAGTTCTGCTGGTGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAATGAAGACTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATTCAGATTTTGCTATGGATATGTACCAGAAAGAACAACTTCATGATAATACTGTGTCAATGATGCAATCTCAACATTTCTCCCAGATGGGGAGGTCTGCTGGTTTCAGTTTGGGAGGATCATATCCATCACATCGTACACAACAGCAACAGCAGCATGCCCCTTCTGTCAGTAGCAATGGTGTCTCATTTTCATCTGTAAACAATCAAGATCTTCTCCATCTGCATGGAACGGATATTTTTCCATCTTCACACTCAACATATCATTCCCAGACCAGTGGGCCTCCTGGCATTGGACTAAGGCCTCTGAATTCTCCAAATACGGTTTCTGGTATGGGTTCATATGACCAGCTTATCCAGCAGTATCAACAGCACCAGAACCAGTCCCAGTTCCGCCTTCAGCAGATGTCAGCTGCAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATGCAAACTGCTCAATCTAGTCCAGATCCATTTGGTGCACTTGGCTTGTTCAGTGTAGTCCATATAAGTGATCCTAACCTGAAATATCTTGCTCATGGGATTGATCTTACAACACTTGGGTTGAATTTGAATTCATCAGAAAACCTTTACAAGACTTTTCGGTCCCCGTGGTCTGATGAACCAGCCAAGGGTGATCCAGAGTTCAGTGTGTTACAATGTTATTATGTTAAACAGCCTCCTGCTCTTCATCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACTTTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAACTATACGCGGCAAATGAACTTTACAAACGTGGTTGGTTTTATCATAAAGAGCATCGTTTATGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTCAAAACAAACACATACGAGAGAGGATCTTACCACTGTTTTGATCCAAACACATTTGAAACAGTCCGGAAGGATAATTTTGTTCTTCATTATGAAATGGTGGAAAAGAGACCGTCTGTGCCTCAACATTGA 1953 0.4296 MSSLLNSSLNGSASNLPDGAGRSFATSFSGSIQGLHNIHGNFNVPNMPSTLTSRNSTINSVPTGGGVQQPSASLSSGRFASNNLPVALSQLSHGSSHGHSGVNSRGGISVVGNPGFNSSTNGVAGPIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSVPGLASRLNLSGNTGSGGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQTVNNLNSMGMLNDVNSGDSTPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLPIVQQNQEFSIQNEDFPALPGFKGGNSDFAMDMYQKEQLHDNTVSMMQSQHFSQMGRSAGFSLGGSYPSHRTQQQQQHAPSVSSNGVSFSSVNNQDLLHLHGTDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAANQSFRDQGMKSMQTAQSSPDPFGALGLFSVVHISDPNLKYLAHGIDLTTLGLNLNSSENLYKTFRSPWSDEPAKGDPEFSVLQCYYVKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVLHYEMVEKRPSVPQH* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0374 650 MobiDBLite consensus disorder prediction 46 78 - -
Gso15g0374 650 Pfam NOT2 / NOT3 / NOT5 family 519 640 IPR007282 GO:0006355
Gso15g0374 650 MobiDBLite consensus disorder prediction 350 380 - -
Gso15g0374 650 Gene3D - 469 650 IPR038635 -
Gso15g0374 650 MobiDBLite consensus disorder prediction 402 430 - -
Gso15g0374 650 MobiDBLite consensus disorder prediction 252 287 - -
Gso15g0374 650 PANTHER CCR4 NOT-RELATED 2 650 IPR040168 GO:0030015
Gso15g0374 650 MobiDBLite consensus disorder prediction 252 284 - -
Gso15g0374 650 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0374 Gso-Chr15 3371541 3379195 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0374 K12605 - gmx:100806559 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0374 15 3371541 3379195 Gso12g0612 12 5670727 5678442 PCT
Gso15g0374 15 3371541 3379195 Gso11g1229 11 11162934 11170913 PCT
Gso12g0612 12 5670727 5678442 Gso15g0374 15 3371541 3379195 PCT
Gso11g1229 11 11162934 11170913 Gso15g0374 15 3371541 3379195 PCT