Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0612 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCTTCATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAAATTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTACACTCACATCAAGAAACTCAACTATAAATAATGTACCATCGGGGGGTGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTCCCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCCCATTCAGGAATCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGCTGCAGTTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTAAACCCAATTTTGGGAAATGCAGGTCCTCGAATCACAAGTTCTGTGGGAAACATGGTTGGAGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTCGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCCGGTGGTTTAGGTATGCAAGGACCGAATCGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCTAGTGGGGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTGAACTCAATGGGGATGTTGAATGATGTGAATACCAATGACAGTTCACCTTTTGACATCAATGACTTCCCTCAACTGACAAGTCGTCCGAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTTAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGTAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGAAGGTCAGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACAACCAGGATCTTCTCCATCTACATGGATCAGATATTTTCCCATCTTCACATTCGACCTATCATTCACAGACCAGTGGACCTCCTGGCATTGGATTAAGGCCGCTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCGTATGACCAGCTCATCCAGCAATATCAACAGCACCAAAATCAGTCCCAGTTCCGCCTTCAAATGTCAGCTGTAAATCAGTCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACTGCACAACCGGCACCAGATCCATTTGGTTTGCTCGGCCTGTTAAGTGTGATCCGGATGAGTGATCCTGACCTGACGTCTCTTGCTCTTGGAATTGATCTTACTACTCTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCTCCATGGTCTGATGAATCAGCTAAGGGCGATCCAGAGTTTACTGTGCCACAATGTTATTATGCCAAACAGCCACCTGCTCTACATCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACTTATTTTACAGCATGCCCAAAGATGAAGCACAATTATACGCCGCCAGTGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTGTGGTTTATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGAAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAAGAGACCACATCTGCCTCAACTTTGA 1977 0.436 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPNFHHTGAIQGLHNIHGSFNVPNMPGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHSGITNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAVGNRNAVPGLGVNPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSGGLGMQGPNRLMSGVLPQGSPQVISMLGNSYPSGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTSRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTAQPAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDESAKGDPEFTVPQCYYAKQPPALHQGYFSKFSVETLFYLFYSMPKDEAQLYAASELYNRGWFYHKEHRLWFIRVPNMEPLVKTNTYERGSYHCFDPSIFETVRKDNFVLHYEMLEKRPHLPQL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0612 658 MobiDBLite consensus disorder prediction 367 390 - -
Gso12g0612 658 MobiDBLite consensus disorder prediction 259 292 - -
Gso12g0612 658 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 657 - -
Gso12g0612 658 MobiDBLite consensus disorder prediction 259 297 - -
Gso12g0612 658 Gene3D - 478 658 IPR038635 -
Gso12g0612 658 PANTHER CCR4 NOT-RELATED 2 657 IPR040168 GO:0030015
Gso12g0612 658 MobiDBLite consensus disorder prediction 59 87 - -
Gso12g0612 658 MobiDBLite consensus disorder prediction 411 439 - -
Gso12g0612 658 Pfam NOT2 / NOT3 / NOT5 family 527 649 IPR007282 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0612 Gso-Chr12 5670727 5678442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0612 K12605 - gmx:100807026 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0612 12 5670727 5678442 Gso11g1229 11 11162934 11170913 GST
Gso15g0374 15 3371541 3379195 Gso12g0612 12 5670727 5678442 PCT
Gso12g0612 12 5670727 5678442 Gso15g0374 15 3371541 3379195 PCT