Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0372 ATGGAGTTCCTCAGTTTACTTTATGGTGCTATGGCATTGTACTTCTGTTTCCTGATCTGGAAATTGTTTGATCAGAGAAGGGACCAAGAGTGCTACGTATTGGACTACCAACTTTACAAGCCAAGCGATGAAAGAAAGCTTGGAACTGAACGCTGTGGGAAGATCATAGGGAGGAACAAGCACTTGGGTCTGAATGAGTACAAGTTCCTCCTCAAGGCCATTGTCAACTCTGGCATTGGTGAGGAAACTTATGCCCCAAGAAACGTCATCGAGGGTCGTGAGGCAAATCCAACATTGGATGATGGTGTCACAGAAATGGAGGAGTTTTTCCATGGCAGCATTGAAAAGCTTCTTGAAAGGTCAGGAATTTCCCCCTCACAGATTGATGTGCTAGTGGTGAATGTTTCTATGTTCGCTGTTGTTCCTTCCTTGACTTCAAGAATCATTAACCACTACAAGATGAGGGAGGACATAAAGGCCTACAACCTCACTGGGATGGGGTGCAGTGCTAGCCTCATTTCCTTGGACATCATAAGGAACATTTTCAAGTCACAAAAGAACAAGTGTGCTCTTTTGGTGACTTCCGAGTCTCTAAGTCCAAACTGGTACAATGGCAAGGACAGATCAATGATTCTCGCCAACTGTTTGTTCAGGACCGGTGGATGTGTCATTCTCTTGACAAACAAAAGGTCCTTGAAGCAAAGGGCCATGTTCAAGTTGAAGTGCTTGGTGAGGACTCATCATGGTGCTAAAGAAGATTCCTATAGTTGCTGCAATCAGAAGGAAGATGAGCAAGGAAAGCTTGGGTTTTACCTTGCCAAAAACCTCCCCAAGGCAGCTACAAGGGCCTTTGTTGAGAACCTAAGGGTGTTGTCACCCAAGGTTTTGCCAACTAGGGAGCTCCTCAGGTTCATGATAGTGTCCCTCATAAAGAAACTGAGCCAAACTAGTTCCCTAAAGTCCTCAGGTGGTGGATCTAGCAAATCCCCTTTGAACTTCAAGACCGGGGTGGAACATTTTTGCCTCCACACAGGAGGAAAGGCTGTGATAGATGGGATTGGAAAGAGCTTGGATCTGTGTGAGTATGATCTTGAGCCAGCAAGGATGACACTGCACCGTTTTGGTAACACTTCAGCAAGTAGCCTGTGGTATGTGCTGGGGTACATGGAAGCCAAGAAGAGGCTCAAGAAAGGTGACAGAGTGTTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTAATGAAGGATCTTGGGGATCATACAAATGTGTGGAGTTACTGCATTGATGACTACCCACCAGAGTCCTTGGCCAACCCTTTCATGGAGACCTTTGGTTGGATCAACAATGTTGAAGATGCAACCAACTTCAAACTTCCAGATTTGTTTCTCAAGTAA 1413 0.4544 MEFLSLLYGAMALYFCFLIWKLFDQRRDQECYVLDYQLYKPSDERKLGTERCGKIIGRNKHLGLNEYKFLLKAIVNSGIGEETYAPRNVIEGREANPTLDDGVTEMEEFFHGSIEKLLERSGISPSQIDVLVVNVSMFAVVPSLTSRIINHYKMREDIKAYNLTGMGCSASLISLDIIRNIFKSQKNKCALLVTSESLSPNWYNGKDRSMILANCLFRTGGCVILLTNKRSLKQRAMFKLKCLVRTHHGAKEDSYSCCNQKEDEQGKLGFYLAKNLPKAATRAFVENLRVLSPKVLPTRELLRFMIVSLIKKLSQTSSLKSSGGGSSKSPLNFKTGVEHFCLHTGGKAVIDGIGKSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCLWEVMKDLGDHTNVWSYCIDDYPPESLANPFMETFGWINNVEDATNFKLPDLFLK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0372 470 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso15g0372 470 CDD CHS_like 19 417 - -
Gso15g0372 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 - -
Gso15g0372 470 Gene3D - 60 419 IPR016039 GO:0016746
Gso15g0372 470 SUPERFAMILY Thiolase-like 64 420 IPR016039 GO:0016746
Gso15g0372 470 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gso15g0372 470 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Gso15g0372 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0372 Gso-Chr15 3351352 3353443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0372 19 469 Acyl Lipid Metabolism Gene Families AT2G28630 68.627 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0372 K15397 - gmx:100790992 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0372 15 3351352 3353443 Gso11g3432 11 50285016 50287205 GST
Gso15g0372 15 3351352 3353443 Gso12g0616 12 5726826 5728759 PCT
Gso15g0372 15 3351352 3353443 Gso11g1226 11 11121325 11123338 PCT
Gso12g0616 12 5726826 5728759 Gso15g0372 15 3351352 3353443 PCT
Gso11g1226 11 11121325 11123338 Gso15g0372 15 3351352 3353443 PCT