Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0350 ATGGGAGACATGGTGGATTATTCTGACTTGAGCAAGATCCCAAAACGAGGCAGTGTCGTGACTGAGAATAAAGCATACAAAAATCTGCTAATTGCATCTCTTCCTAAAAGTTTTGTACAGAGAAACCATGGACATCTCATTTCACTGGTCCGTGGCCGCTTTGGAATTAGAGATGTGGGTGGTATCACATTTTTTTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGTTCTCCAAGAGCAGATGCCCATGTATATGGCGAGGCCTTCAGGCTCTACAAATCCTATGTTACCCACCTTTTAAATGGATTCAGAGGTGGGAACCCTTCAAGAATTTGGTTGACAGCATGCAGGTCCTATCAAGACCGTTGCTAGCCCTTTCAATTGCAACGTTGTTTTCTGATCTATCAAAATGTAGTGATGGAAAGTCAGATTGTAGTACTGATTCACAAGATGCAGTAGCATACTCAGAATTATCTCCTTTACAGGTTGATTTGAATACAGGCAAGTGTTTGACAGATCCTAAAATTTTAGAATCTGAGAAGTGGTTGACTCTACTCATTCAAGAGCTTGAAAATCAAGGGCTTAGTTTACCAGAAAGGCTTTTATGCAGAATCAATGATGACGAGCTTAGCAGATTTTATGCCGCTTCTAATAATGATTTTTCATGCTTCCTTACCTCAATAAAGAAGACCATACGATGGCGAGAGACTTACAGAATTCTCTCAGAAGAAGAGCTGAAAATGTGGTCCAAAATGGTGTTCTGGCATGGGTCTGATGTGGGGCACAGACCTTGCCTAATCGTAAGGCTTGGGTTAGCCTGCAGTACATTGACATCTGAAGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGCGTCTTGCACTTGGTTGATGCAGGCAACCCACAAATTACAGTGTTGGTGGACTGTGAAGGGTTGCCACCAGTGAGGATTCCCATGCAAATAATCAGATCTTGTTCTTCTCTTCTGCAAGACCACTTTCCTAATTGTCTTGGTTGCATGTTTGTCATTCGACTGCCGGCCAATGTTCTTGTTATTTCCCAGACTTTTATTCAGACTTTGGAGCCTGCTACGAGAAACAAGTTGAAAATAGAAGGGGAGATGTATCAGAAAGTTCTTTCTGACTATCTGCCAAAACTGCCTTCATATCTTGGAGGCTGCTGTACTTGCATGAAATGCTCCAACATTGACCATGGGAATATGCTGCAAACTTATGCAACTGGGACCAGCAGGAGAGATGGGTTGGAGGACACCACTGACAGAGACAATGACAATGAGGATTCTCCAACATTGCATCCTTCCAATGAATTAGAAGGCAACTTATATGCTAATTATGACCAGTTGTTAAGAACTGCTATAGTAGGTATTCTTATGTTTTGGGTTTTTATAGCTCTTGGTGCTTTAGTATTTGATCCCAGCAATCTTCACTAG 1467 0.4172 MGDMVDYSDLSKIPKRGSVVTENKAYKNLLIASLPKSFVQRNHGHLISLVRGRFGIRDVGGITFFLLKVAALEIIRRFSKSRCPCIWRGLQALQILCYPPFKWIQRWEPFKNLVDSMQVLSRPLLALSIATLFSDLSKCSDGKSDCSTDSQDAVAYSELSPLQVDLNTGKCLTDPKILESEKWLTLLIQELENQGLSLPERLLCRINDDELSRFYAASNNDFSCFLTSIKKTIRWRETYRILSEEELKMWSKMVFWHGSDVGHRPCLIVRLGLACSTLTSEDRPRFAQAVISQVEYGVLHLVDAGNPQITVLVDCEGLPPVRIPMQIIRSCSSLLQDHFPNCLGCMFVIRLPANVLVISQTFIQTLEPATRNKLKIEGEMYQKVLSDYLPKLPSYLGGCCTCMKCSNIDHGNMLQTYATGTSRRDGLEDTTDRDNDNEDSPTLHPSNELEGNLYANYDQLLRTAIVGILMFWVFIALGALVFDPSNLH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0350 488 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 244 404 IPR001251 -
Gso15g0350 488 MobiDBLite consensus disorder prediction 425 443 - -
Gso15g0350 488 Pfam CRAL/TRIO domain 251 398 IPR001251 -
Gso15g0350 488 SUPERFAMILY CRAL/TRIO domain 252 403 IPR036865 -
Gso15g0350 488 SMART sec14_4 248 401 IPR001251 -
Gso15g0350 488 MobiDBLite consensus disorder prediction 421 447 - -
Gso15g0350 488 Gene3D - 178 434 IPR036865 -
Gso15g0350 488 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 15 486 - -
Gso15g0350 488 CDD SEC14 244 398 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0350 Gso-Chr15 3159293 3166495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0350 - - gmx:100786215 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0350 15 3159293 3166495 Gso11g3459 11 50496037 50500737 GST
Gso15g0350 15 3159293 3166495 Gso11g1196 11 10793858 10799239 PCT
Gso11g1196 11 10793858 10799239 Gso15g0350 15 3159293 3166495 PCT