Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0330 ATGGGTAGCCCCAAGAAGAATGAAAATAAGGGCTTTTTCGCCGCCATGACTTCCGGCATCTCCATGTTCAGCAGCGCCATGCACCGATCTGTCAACGGATTGCTGGGATATGAAGGGGTAGAAGTCATAAATCCGGACGGTGGTAAAGAGGATGCAGAGGAGGAAGCTCAAAGAGGAAGATGGAAACCAGAGGAAAGAGATGGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTAACATCAATGGTAACACTACCAGTTATTATTTTTGAACCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACCTGTTAGATCAGGCAGATGAATGTGAGGACCCATACATGCGGCTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTCGCATACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGGGTAACCCTCAAGAGGGATGGTGTAGTCATAGATTTGGTTCCCCCTCCAACCAAGGTTAATAATTTGATATTTGGCCGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAACTTGACAACTGGAGACAAAGTTGTACTATACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCTGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGCGATTCGGAAGGAGAGCCTCTTCCAGGCACTGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCAAAGAATGATAAATTCCAGTATACATACTTTGCACATAAAATAAACAGCTTTGACACTGCCCCTAAAAAATTGTTGGCATCAGACTCTCGTTTACGTCCAGATAGATATGCACTTGAGATGGGTGATCTATCCAAATCAGGGGCAGAAAAGAGCAGTTTGGAGGACAAGCAACGCACTGAAAAGAAAATCCGAGAAGCCAAAGAGCATAAATTTACACCGAGATGGTTTGATTTAACTGAAGAAGTGACATCAACTCCTTGGGGTGATTTGGAGATCTATCAATACAATGGTAAATACACCGAGCATCGGGCTGCTATAGATAACTCAGGCAGCATTGATCATGTTGATAATAAAGAAATTGAATTCAATCCATGGCAGTATGGCAATTTGTCCACCGAATGA 1371 0.4252 MGSPKKNENKGFFAAMTSGISMFSSAMHRSVNGLLGYEGVEVINPDGGKEDAEEEAQRGRWKPEERDGYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVIDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAPKKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEDKQRTEKKIREAKEHKFTPRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRAAIDNSGSIDHVDNKEIEFNPWQYGNLSTE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0330 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Gso15g0330 456 Gene3D - 150 327 - -
Gso15g0330 456 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Gso15g0330 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Gso15g0330 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Gso15g0330 456 Gene3D - 358 449 - -
Gso15g0330 456 SUPERFAMILY Oxysterol-binding protein-like 62 438 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0330 Gso-Chr15 2974798 2979731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0330 - - gmx:100779808 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0330 15 2974798 2979731 Gso12g0515 12 4599509 4604627 PCT
Gso15g0330 15 2974798 2979731 Gso11g1177 11 10574566 10579876 PCT
Gso12g0515 12 4599509 4604627 Gso15g0330 15 2974798 2979731 PCT
Gso11g1177 11 10574566 10579876 Gso15g0330 15 2974798 2979731 PCT