Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0515 ATGGGTAGCCCCTCGAAGAAGAATGAAAGTAAGGGGTTTTTCGCCGCCATGTCTTCCATGTTCACCAGCGCTGTGAACCGATCAGTCAACGGGCTTAGTGTAGAAGTCATAAATCCAGAGGGAGGTAAAGAAGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAAACAGGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAGTATATTGGCTCGGATGTAACATCAATGGTGACATTACCTGTTATTATATTTGAACCAATGACTATGATTCAGAAAATTGCTGAGTTGATGGAGTACTCCTACTTGTTAGATCAAGCAGATGAATCAGAGGATCCATACATGCGGTTAGTTTATGCAACATCATGGGCTATATCGGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGTTAACCATGGTGGAATTACATTTCTTGCTGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGCGCATGCCGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAACTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTGACCCTTAAGAGAGATGGTGTTGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGAACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCTGGTCGATATGAAGTGGATGGATATATTTATAATTCTTCAGAGGAGCCTAAAATATTAATGACAGGGAAGTGGAATGAGTCAATGAGTTATCAACCCTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCCCAGAATGACAAATTTCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGATTCTCGACTACGCCCAGATAGATATGCACTCGAGATGGGCGATCTGTCAAAATCTGGGACAGAAAAGAGCAGTTTGGAGGAAAGGCAGCGTGCTGAAAAGAGAAGCCGAGAGGAGAAAGGGCATAGCTTCACACCAAGATGGTTTGATTTAACTGAAGAAGTGACATCAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACAGTGAACATCGAGCTGCTGCAGATAACTCAGGAAGCATTGATGATGTTGATGCTAAATCAATTGAATTCAATCCATGGCAGTATGGTAATTTGGCCACGGAATGA 1353 0.4176 MGSPSKKNESKGFFAAMSSMFTSAVNRSVNGLSVEVINPEGGKEDAEEEAQRGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMIQKIAELMEYSYLLDQADESEDPYMRLVYATSWAISVYFAYQRTWKPFNPILGETYEMVNHGGITFLAEQVSHHPPMSAAHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPQNDKFQYTHFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGTEKSSLEERQRAEKRSREEKGHSFTPRWFDLTEEVTSTPWGDLEIYQYNGKYSEHRAAADNSGSIDDVDAKSIEFNPWQYGNLATE* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0515 450 MobiDBLite consensus disorder prediction 356 386 - -
Gso12g0515 450 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 447 IPR000648 GO:0008289
Gso12g0515 450 Gene3D - 352 440 - -
Gso12g0515 450 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 447 - -
Gso12g0515 450 Gene3D - 144 321 - -
Gso12g0515 450 MobiDBLite consensus disorder prediction 365 386 - -
Gso12g0515 450 Pfam Oxysterol-binding protein 63 420 IPR000648 GO:0008289
Gso12g0515 450 ProSitePatterns Oxysterol-binding protein family signature. 160 171 IPR018494 -
Gso12g0515 450 SUPERFAMILY Oxysterol-binding protein-like 57 430 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0515 Gso-Chr12 4599509 4604627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0515 - - gmx:100810228 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0515 12 4599509 4604627 Gso11g1177 11 10574566 10579876 GST
Gso15g0330 15 2974798 2979731 Gso12g0515 12 4599509 4604627 PCT
Gso12g0515 12 4599509 4604627 Gso15g0330 15 2974798 2979731 PCT