Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1177 ATGGGTAGCCCCTCGAAGAAGAACGAAAGTAAGGGGTTTTTCGCCGCCGTGTCTTCCATGTTCACCAGCGCTGTCAACCGATCGGTCAACGGGCTTAGTGTAGAAGTCATAAATCCAGAGGGAGGTAAAGAAGATTCGGAGGAGGAAGCTCAGAGAGGAAGATGGAAACAGGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAAGTATATTGGCTCGGATGTAACATCAATGGTGACACTACCAGTTATTATATTTGAACCAATGACTATGATTCAGAAAATTGCTGAGTTGATGGAGTACTCCTACTTGTTAGATCAAGCAGATGAATCAGAGGATCCATACATGCAGTTAGTTTATGCAACATCATGGGCCATATCGGTGTACTTTGCGTACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGTTAACCATGGTGGAATTACATTTCTTGCTGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGCGCATGCCGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTGAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACTCGTGTGACCCTTAAGAGAGATGGTGTTGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACCTCATATTTGGCCGAACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTACTATATTTTCAACCATGTGGATGGTTTGGTGCTGGTCGATATGAAGTGGATGGATATATTTATAATTCTTCCGAGGAGCCTAAAATATTAATGACAGGGAAGTGGAATGAGTCAATGAGTTATCAGCCCTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCCCAGAATGACAAATTTCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAAAAAGTTGTTGGCGTCAGATTCTCGTCTACGCCCAGATAGATATGCACTCGAGATGGGCGATCTGTCAAAATCTGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAAGCCGAGAGGAGAAAGGGCATAGCTTCACACCAAGATGGTTTGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGGTAAATACACTGAACATCGGGCTGCTGCAGATAACTCGGGAAGCATTGATGATGTTGATGTTAAATCAATTGAATTTAATCCATGGCAGTATGGTAATTTGGTCACGGAATGA 1353 0.4235 MGSPSKKNESKGFFAAVSSMFTSAVNRSVNGLSVEVINPEGGKEDSEEEAQRGRWKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMIQKIAELMEYSYLLDQADESEDPYMQLVYATSWAISVYFAYQRTWKPFNPILGETYEMVNHGGITFLAEQVSHHPPMSAAHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNESMSYQPCDSEGEPLPNTELKEVWHVADVPQNDKFQYTHFAHKINSFDTAPKKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKRSREEKGHSFTPRWFDLTEEVTPTPWGDLEIYQYNGKYTEHRAAADNSGSIDDVDVKSIEFNPWQYGNLVTE* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1177 450 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 447 - -
Gso11g1177 450 Gene3D - 144 321 - -
Gso11g1177 450 Pfam Oxysterol-binding protein 63 420 IPR000648 GO:0008289
Gso11g1177 450 MobiDBLite consensus disorder prediction 358 386 - -
Gso11g1177 450 MobiDBLite consensus disorder prediction 365 386 - -
Gso11g1177 450 SUPERFAMILY Oxysterol-binding protein-like 57 430 IPR037239 -
Gso11g1177 450 ProSitePatterns Oxysterol-binding protein family signature. 160 171 IPR018494 -
Gso11g1177 450 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 447 IPR000648 GO:0008289
Gso11g1177 450 Gene3D - 352 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1177 Gso-Chr11 10574566 10579876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1177 - - gmx:100808070 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1177 11 10574566 10579876 Gso11g1177 11 10574566 10579876 ECH
Gso12g0515 12 4599509 4604627 Gso11g1177 11 10574566 10579876 GST
Gso15g0330 15 2974798 2979731 Gso11g1177 11 10574566 10579876 PCT
Gso11g1177 11 10574566 10579876 Gso15g0330 15 2974798 2979731 PCT