Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0281 ATGCATAAACCCGCAGAGGCACTAGACTTTGCTCTCAGGGAGACCTCACCCAACATAGGGGCAGGTGCGGTAATGAGGGACAAGCTTTCCTGCACCTATGACCTGGTTGAACAAATGCAGTACCTCTATGTTAGAGTGGTGAAAGCCAAGGATTTGCCAGGGAAAGATGTTACTGGTGGTGTGGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTCACCAAGCACTTTGAGAAAAAGTCCAATCCTCAGTGGAATCAGGTTTTTGCCTTTTCCAAAGAAAGGATTCAAGCTTCTGTTCTGGAGTTGGTGATCAAAGACAAAGATGTTGTTGTGGATGACTTTGTAGGGAGAGTGATGTTTGATATTAATGAAATCCCAAAACGTGTGCCCCCGGATAGCCCTTTGGCTCCCCAGTGGTACAGGCTGGAAGATAGGAGAGGTGACAAAGCCAAGGGAGAGTTAATGTTAGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCTGCAACTGTTGGTCCTGAAGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGAGTCAATGTTATTGAGGCTCAAGACTTGGTACCAAGTGACAAAACCCGGTATCCTGAAGTCTTTGTGAAGGCTAATCTGGGGATCCAGTTTTTAAGAACTAGAGTATCTCAAAGTAAGACCATAAATCCTATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAACCATTTGAGGAGCCCTTGGTTCTGACTGCAGAAGACAGGGTTGGACCAAACAAGGATGAGATCTTGGGAAGGTGTTTGATTCCTTTACACAATGTGCAAAGGAGGTTGGACCACAAGCCCGTGAACACAAAGTGGTTTAATCTTGAAAAGCATGTGGTTGTTGAGGGGGAACAGAAGAAAGAGACCAAGTTCTCAAGTAGGATACATTTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGTTGGATGAATCAACACACTATAGTAGTGATCTTAGGCCAACTGCAAAGCAGCTGGGCAAGGCCAGCATTGGAATTCTGGAAGTGGGGATTATAAGTGCACAAGGGTTGATGCCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCCTATTGTGTAGCAAAGTATGGGCAAAAGTGGATCCGTACTAGGACAATTGTGGATAGTCTTGCTCCAAGGTGGAATGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTTATCACAGTTGGAGTTTTTGATAATGGTCATTTACATGGGGGAGACAAATCAGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCAACTCTTGAAGCTGATAGGGTGTATACATACTCTTATCCTCTTTTGGTACTGTACAATTCAGGTGTGAAGAAAATGGGAGAAGTGCAATTGGCTGTAAGGTTCACAAGCTTATCTTTGATAAACATGCTGTGTATGTATTCACAGCCATTGTTGCCAAAGATGCACTACATTCATCCTCTATCTGTGATTCAGCAAGACAGTCTCAGGCATCAAGCAATCCAGATTGTGTCAATGAGGCTGAGCCGGGCTGAGCCACCACTGAGGAAAGAGGTGGTGGAATACATGCTAGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATTACCAAAGTCCTTGGTGGGTTGATAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCTCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAGCTAATACTTCCAACAATTTTCCTTTACCTTTTTATGGTTGGAATTTGGAACTTCCGATGGAGGCCAAGACACCCTCCTCATATGGACACAAGGCTATCACATGCTGATGCTGCTCATCCTGATGAACTAGATGAAGAGTTTGACACATTCCCAACTTCACGATCATCGGATATGGTTAGGATGAGGTACGATCGCTTAAGAAGCATTGCAGGGAAGGTCCAAACTGTTGTAGGTGACTTGGCCACTCAAGGAGAAAGGTTCCACAATCTGCTTAGTTGGAGAGACACAAGGGCTACCACTCTCTTTGTTACATTCTGTTTCATTGCTGCAATAGTTCTCTATGTTACTCCCTTCCAAGTTGTGTTCCTTCTAATTGGCTTCTATGTGCTAAGGCACCCCAGATTCCGCCAGAAACATCCTTCAGTCCCATTCAACTACTTCAAGAGGTTGCCTGCTAGAGTAGACAGCATATTGTAA 2325 0.44 MHKPAEALDFALRETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKKSNPQWNQVFAFSKERIQASVLELVIKDKDVVVDDFVGRVMFDINEIPKRVPPDSPLAPQWYRLEDRRGDKAKGELMLAVWMGTQADEAFPDAWHSDAATVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLVPSDKTRYPEVFVKANLGIQFLRTRVSQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPNKDEILGRCLIPLHNVQRRLDHKPVNTKWFNLEKHVVVEGEQKKETKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLGKASIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSLAPRWNEQYIWEVFDPCTVITVGVFDNGHLHGGDKSGGSKDSRIGKVRIRLSTLEADRVYTYSYPLLVLYNSGVKKMGEVQLAVRFTSLSLINMLCMYSQPLLPKMHYIHPLSVIQQDSLRHQAIQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRITKVLGGLIAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTIFLYLFMVGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAAIVLYVTPFQVVFLLIGFYVLRHPRFRQKHPSVPFNYFKRLPARVDSIL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0281 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Gso15g0281 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Gso15g0281 774 Gene3D C2 domain 31 164 IPR035892 -
Gso15g0281 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 774 - -
Gso15g0281 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 496 IPR035892 -
Gso15g0281 774 CDD C2B_MCTP_PRT_plant 41 165 - -
Gso15g0281 774 Gene3D C2 domain 187 333 IPR035892 -
Gso15g0281 774 CDD C2C_MCTP_PRT_plant 202 352 - -
Gso15g0281 774 Pfam C2 domain 201 307 IPR000008 -
Gso15g0281 774 Pfam C2 domain 41 133 IPR000008 -
Gso15g0281 774 Pfam C2 domain 363 474 IPR000008 -
Gso15g0281 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Gso15g0281 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Gso15g0281 774 Gene3D C2 domain 361 498 IPR035892 -
Gso15g0281 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 774 - -
Gso15g0281 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Gso15g0281 774 SMART C2_3c 41 137 IPR000008 -
Gso15g0281 774 SMART C2_3c 202 300 IPR000008 -
Gso15g0281 774 SMART C2_3c 364 471 IPR000008 -
Gso15g0281 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Gso15g0281 774 CDD C2D_MCTP_PRT_plant 364 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0281 Gso-Chr15 2561624 2564866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0281 1 774 Lipid Metabolism Gene Families AT3G57880 80.258 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0281 - - gmx:100809753 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0281 15 2561624 2564866 Gso11g3526 11 51083587 51086820 GST
Gso15g0281 15 2561624 2564866 Gso11g1110 11 9960743 9963730 PCT
Gso11g1110 11 9960743 9963730 Gso15g0281 15 2561624 2564866 PCT