Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3526 ATGCATAAACCAGCAGAGGCACTAGACTTTGCTCTCAAGGAGACTTCACCCAACATAGGTGCGGGTGCTGTAATGAGGGACAAGCTTTCCTGTACCTATGACCTGGTTGAACAAATGCAGTACCTCTATGTTAGAGTGGTGAAAGCCAAGGATTTGCCAGGGAAAGATGTTACTGGTGGTGTGGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTTACCAAGCACTTTGAGAAAAATTCCAATCCTCAGTGGAATCAGGTTTTTGCCTTCTCCAAAGAAAGGATTCAAGCTTCTGTTCTGGAGGTGGTGATCAAAGACAAGGATGTTGTTGTGGATGACTTCGTAGGGAGAGTGATGTTTGATATTAATGAAATCCCAAAACGTGTGCCTCCAGATAGCCCTTTGGCTCCACAGTGGTACAGGCTAGAAGATAGGAGGGGTGGCAAAGCCAAAGGAGAGTTAATGTTGGCGGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTGTTGGTCCTGAAGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAGGCTCAAGACTTGGTACCAAGTGACAAAACCCGGTATCCTGAAGTCTTTGTGAAGGCTAATCTGGGGGTTCAGTTTTTAAGAACTAGAGTATCTCAAAGTAAAACCATAAATCCAATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAGCCCTTGGTTCTGACTGCAGAGGACAGGGTTGGACCAAGCAAGGATGAGATCCTGGGAAGGTGTGTGATTCCTTTACACAATGTGCAAAGGAGGTTGGACCACAAGCCTGTGAACACAAAGTGGTTTAATCTGGAAAAGCATGTGGTTGTTGAAGGGGAACAAAAGAAGAAGGAGATCAAGTTCTCAAGTAGGATACATCTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGTTGGATGAATCAACACACTATAGTAGTGATCTTAGGCCAACTGCAAAGCAGCTGTGGAAGGCTAGCATTGGAATTCTGGAAGTTGGGATTATAAGTGCACAAGGGTTGATGCCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCTTATTGTGTAGCAAAATATGGGCAGAAGTGGATCCGTACTAGGACAATTGTGGATAGTCTTGCTCCAAGGTGGAATGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTTATCACAGTTGGGGTTTTTGATAATGGTCACTTACATGGGGGAGACAAATCAGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAGCTGATAGGGTGTACACACACTCTTATCCTCTTTTGGTACTGCACAATTCAGGTGTGAAGAAAATGGGAGAAGTGCAATTGGCTGTAAGATTCACAAGCTTATCTTTGATAAACATGCTGTGTATGTATTCACAGCCATTGTTGCCAAAGTTGCATTACATCCATCCTCTATCTGTGATTCAGCTAGACACTCTTAGGCATCAAGCTATCAAGATTGTGTCAATGAGGTTGAGCAGGGCTGAGCCACCACTGAGGAAAGAGGTGGTGGAATACATGCTAGATGTAGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAACCAAAGTTCTAGGAGGGTTGTTAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCTCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAGCTAATACTTCCAACAATTTTCCTTTACCTTTTTTTGGTTGGAATTTGGAATTTCCGATGGAGGCCAAGACACCCTCCTCATATGGACACAAGACTATCACATGCTGATGCTGCTCATCCTGATGAACTAGATGAAGAGTTTGATACATTCCCAACTTCACGATCATCGGATATGGTTAGGATGAGGTATGATCGCTTAAGAAGCATTGCCGGGAAGGTCCAAACTGTTGTAGGTGACTTGGCCACTCAAGGAGAAAGGTTCCATAATCTGCTTAGTTGGAGAGACACAAGGGCTACCACTCTTTTTGTGACATTCTGTTTCATTGCTGCAGTAGTTCTCTATGTCACTCCCTTCCAAGTTGTGTTCCTTCTAATTGGCTTCTATTTGCTAAGGCACCCCAGATTCCGCCAGAAACATCCTTCAGTCCCATTCAACTACTTCAAGAGGTTGCCAGCTAGAGTAGACAGCATATTGTAA 2328 0.4364 MHKPAEALDFALKETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKNSNPQWNQVFAFSKERIQASVLEVVIKDKDVVVDDFVGRVMFDINEIPKRVPPDSPLAPQWYRLEDRRGGKAKGELMLAVWMGTQADEAFPDAWHSDAATVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLVPSDKTRYPEVFVKANLGVQFLRTRVSQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPSKDEILGRCVIPLHNVQRRLDHKPVNTKWFNLEKHVVVEGEQKKKEIKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLWKASIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSLAPRWNEQYIWEVFDPCTVITVGVFDNGHLHGGDKSGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHNSGVKKMGEVQLAVRFTSLSLINMLCMYSQPLLPKLHYIHPLSVIQLDTLRHQAIKIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRITKVLGGLLAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTIFLYLFLVGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAAVVLYVTPFQVVFLLIGFYLLRHPRFRQKHPSVPFNYFKRLPARVDSIL* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3526 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Gso11g3526 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Gso11g3526 775 CDD C2B_MCTP_PRT_plant 41 165 - -
Gso11g3526 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Gso11g3526 775 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Gso11g3526 775 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 775 - -
Gso11g3526 775 Gene3D C2 domain 187 334 IPR035892 -
Gso11g3526 775 Gene3D C2 domain 25 163 IPR035892 -
Gso11g3526 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 497 IPR035892 -
Gso11g3526 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 355 IPR035892 -
Gso11g3526 775 Gene3D C2 domain 362 499 IPR035892 -
Gso11g3526 775 CDD C2D_MCTP_PRT_plant 365 492 - -
Gso11g3526 775 CDD C2C_MCTP_PRT_plant 202 353 - -
Gso11g3526 775 Pfam C2 domain 364 475 IPR000008 -
Gso11g3526 775 Pfam C2 domain 41 133 IPR000008 -
Gso11g3526 775 Pfam C2 domain 201 307 IPR000008 -
Gso11g3526 775 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Gso11g3526 775 SMART C2_3c 41 137 IPR000008 -
Gso11g3526 775 SMART C2_3c 365 472 IPR000008 -
Gso11g3526 775 SMART C2_3c 202 300 IPR000008 -
Gso11g3526 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3526 Gso-Chr11 51083587 51086820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3526 1 775 Lipid Metabolism Gene Families AT3G57880 80.155 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3526 - - gmx:100807941 1532.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0281 15 2561624 2564866 Gso11g3526 11 51083587 51086820 GST
Gso11g3526 11 51083587 51086820 Gso11g1110 11 9960743 9963730 PCT
Gso11g1110 11 9960743 9963730 Gso11g3526 11 51083587 51086820 PCT