Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0120 ATGGGTGCTTCTCTTCCTCCCAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCCGATGCCATTTTGAAAAAATTCCCTGACCATGGAGAAACTTTGTCAATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCTGAGGCATATGAACTGGTTCGCCAAGGTTTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGCTTATGGTCTCCTGTATCGGTCAGATAGAGAATACAGGGAAGCAATAAAGTGTTATCGAAATGCATTGAAAATAGATCCTGACAATATTGAAATCTTGCGGGACTTATCACTTTTACAGGCTCAAATGCGAGACTTAACTGGCTTTGTTGAGACACGACAACAACTTCTGACGCTCAAGTCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCACATCATTTGAACTCTAATGCATCAAAGGCTATTGAAATTCTGGAAGCGTATGAAGGGACATTGGAAGATGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTGTATAAGATCTCCTTGTTAGAAGAATGTGGATTTTTTCAGAAAGCTCTGGAGGAGTTGCAAAAGAAAGAGTTAAAAATTGTTGATAAGCTTGCTTATAAAGAACAGGAGGTTTCACTTCTAGTTAAGCTTGCCCACTTAGAAGAAGGGGAGAAATTGTACCGGAAATTACTTTCCATGAATCCTGACAATTATAGATATTATGAAGGCCTCCAAAAATGTGTTGGATTATATTCAGAAAATGGCCATTATTCTCTTGATGAAATAGATCAGTTAGATGCCTTGTACAGAACACTTGGGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTCGATTTTTTACAAGGTGACAAATTTCAAGAAGCAGCAAATAATTATATTAGGCCCCTCCTCACTAAGGGAATTCCATCTCTTTTCTCTGATCTTTCTTCGTTATACAATCAACCCGGGAAGGCAGACATTTTGGAACAAATCATTCTTGAGATAGAGAGTTCAATTAAGACCACTAGTCAATACCCTGGAGGGATGGAAAAAGAGCCACCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGACGGGGCCAATATGAAATTGCTCTTTCTAAAATCAATGAGGCTATTGATCACACACCTACCGTCATTGATCTGTATTCAGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAGGCTAGGTGTATGGATCTTGCCGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAACTGCTGTGTTGTTCACAAAAGATGGTGATCAACACAACAACCTGCATGATATGCAGTGCATGTGGTATGAGCTTGCCGGTGCTGAAAGCTATTTTCGCCAAGGTAATCTTGGAATGGCTCTCAAGAAATTTCTGGCTGTGGAGAAGCATTATGCAGATATTACAGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGTACATATGTTGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATACTTTCATAAAGCAGCTGCTGGAGCAATCAGATGTTATATCGAATTGCATGATTCTCCTCCAAAGTTGACAACAGAGGAAGATAATGATCTGTCTAAGTTGCTTCCTTCTCAAAAAAAGAAAATGAGGCAAAAACAGAGGAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAATCAAGTGCTGGTGGGATATCAAAGTCTGGAAAACGGCATGCAAAACCTGTTGATCCGGATCCATGTGGTGAAAAATTGTTGCAGGTCGAAGATCCTTTGTTGGAAGCCACAAAATACTTGAAGCTGCTGCAGAAGAACTCACCTGATTCATTGGAGACACACTTTCTCTCTTTTGAATTATATATGAGAAAACAGAGGATTTTGCTTGCATTCCAGGCTGTGAAGCAATTACTGAGGTTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTCAATAAAGTAGGATCTATGATTGCTCCTGTGACTGACAGTGAGAAACTCATTTGGAGTGTCTTAGAAGCTGAGCGCCAAACTATTAGTCAGCTGCATGGTAAATCTCTGTTTGAGACAAATAACTCTTTCCTTGAAAAACATGAAGATTCTTTGACGCATAGAGCTGCTTTTGGAGAAACGTTATATATTTTGGATCCCAACAGAAGGTCTGAAGCTGTCAAGTTGATCGAAGGGTCACCAAATAATATTGTGCCAACAAATGGAGTGCTTGGACCAATCAGGGAATGGAAACTTATAGATTGTGTTGCAGTTCATAAACTTCTTGGAACAGTTCTTGTTGATCAGGATGCTGCATTAAGATGGAAAGTGCGTTGTGCTGAGCTTTTCCCATACTCCACGTACTTTGAGGGCAGTCGCAGCTCTGCCTCTCCCAACTCTGCCTTTAATCAGATACGCAAGAGCTCTGAAAATGGGAGTTCAAACCATTCGGTGGGTGATCACAATGCGGAATCCGGCACATCAAATGGCAAACTAGAGGCATTCAAAGATCTCACTATCTGA 2706 0.4039 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHAYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAIEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGFFQKALEELQKKELKIVDKLAYKEQEVSLLVKLAHLEEGEKLYRKLLSMNPDNYRYYEGLQKCVGLYSENGHYSLDEIDQLDALYRTLGQQYKWSSAVKRIPLDFLQGDKFQEAANNYIRPLLTKGIPSLFSDLSSLYNQPGKADILEQIILEIESSIKTTSQYPGGMEKEPPSTLMWTLFLLAQHYDRRGQYEIALSKINEAIDHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELAGAESYFRQGNLGMALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIELHDSPPKLTTEEDNDLSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSAGGISKSGKRHAKPVDPDPCGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHFLSFELYMRKQRILLAFQAVKQLLRLDAEHPDSHRCLIKFFNKVGSMIAPVTDSEKLIWSVLEAERQTISQLHGKSLFETNNSFLEKHEDSLTHRAAFGETLYILDPNRRSEAVKLIEGSPNNIVPTNGVLGPIREWKLIDCVAVHKLLGTVLVDQDAALRWKVRCAELFPYSTYFEGSRSSASPNSAFNQIRKSSENGSSNHSVGDHNAESGTSNGKLEAFKDLTI* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0120 901 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515
Gso15g0120 901 Gene3D - 505 723 - -
Gso15g0120 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Gso15g0120 901 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Gso15g0120 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Gso15g0120 901 MobiDBLite consensus disorder prediction 581 642 - -
Gso15g0120 901 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Gso15g0120 901 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
Gso15g0120 901 Gene3D - 2 503 - -
Gso15g0120 901 Pfam TPR repeat 84 123 - -
Gso15g0120 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Gso15g0120 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Gso15g0120 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Gso15g0120 901 MobiDBLite consensus disorder prediction 851 890 - -
Gso15g0120 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
Gso15g0120 901 Coils Coil 596 620 - -
Gso15g0120 901 ProSiteProfiles TPR repeat region circular profile. 77 110 - -
Gso15g0120 901 MobiDBLite consensus disorder prediction 606 622 - -
Gso15g0120 901 PIRSF NAT_A 1 818 IPR021183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0120 Gso-Chr15 1041185 1054218 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0120 K20792 - gmx:100776968 1734.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0120 15 1041185 1054218 Gso11g3684 11 52467331 52480998 GST
Gso15g0120 15 1041185 1054218 Gso8g1727 8 16865580 16879296 PCT
Gso8g1727 8 16865580 16879296 Gso15g0120 15 1041185 1054218 PCT