Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3684 ATGGGTGCTTCTCTTCCTCCAAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCCTACGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCCGATACCATTTTGAAAAAATTTCCTGACCATGGAGAAACTTTATCAATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCTGAGGCATACGAACTGGTTCGCCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTGTATCGGTCAGACAGAGAATATAGGGAAGCAATAAAGTGTTATCGGAATGCACTGAAAATAGATCCTGACAATATTGAAATCTTGCGGGACCTATCACTTTTACAGGCTCAAATGCGAGACTTATCTGGCTTTGTTGAGACACGACAGCAACTTCTGACGCTCAAGTCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCTCATCATTTGAACTCTAATGCATCAAAGGCTATTGAAATTCTGGAAGCGTATGAAGGGACATTGGAAGATGATTATCCTCCAGAAAATGAATGGTGTGAGCATGGGGAAATGCTTTTGTATAAGATCTCCTTGCTAGAAGAATGCAGATTTTTTCAGAAAGCTCTTGAGGAGTTGCAAAAGAAAGAGTTAAAAATTGTTGATAAGCTTGCATATAAAGAACAGGAGGTTTTACTTCTAGTTAAGCTTGGCCGCTTAGAAGAAGGGGAGAAATTGTACCGGACATTACTTTCCATGAATCCTGACAATTATAGATATTATGAAGGCCTCCAAAAATGTGTTGGATTATATTCAAAAAATGGTCATTATTCTCCTGATGAAATAGATCGGTTAGATGCCTTGTACAAAACACTTGGGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTGGATTTTTTACAAGGTGACAAATTTCATGAAGCAGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTTTTCTCAGATCTTTCTTCGCTATACAATCAACTTGGGAAGGCAGACATTTTGGAACAGATCATTCTTGAGATAGAGAGTTCTATTAAGACCACTAGTCAATACCCTGGAGGGATGGAAAAAGAGCCGCCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGACGGGGCCAATATGAAATTGCTCTTTTTAAAATCAATGAGGCTATTGATCACACACCTACCGTCATTGATCTGTATTCAGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCTGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTCGCTTTGGCAGAAAAAACTGCTGTGTTGTTCACAAAAGATGGTGATCAGCACAACAACCTACATGATATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTATTTTCGCCAAGGTAATCTTGGAATGGCTCTGAAGAAATTTCTGGCTGTTGAGAAGCATTATGCAGACATTACAGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACGTTGCGTACATATGTTGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATACTTTCATAAAGCAGCTGCTGGAGCTATCAGATGTTATATCAAATTGCATGATTCTCCCCCAAAGTCAACAGCCGAGGAAGATAATGACATGTCTAAGTTGCTTCCTTCTCAAAAAAAGAAAATGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAATCAAGTGCTGGTGGGATATCAAAGTCTGGGAAACGGCAGGCAAAACCCATTGATCCGGATCCACGTGGTGAAAAGTTGTTGCAGGTCGAAGATCCTTTGTTGGAAGGCACAAAATACTTGAAGCTGCTGCAGAAGAATTCACCAGATTCAGTGGAGACGCACTTTCTCTCTTTTGAATTATATATGAGAAAACAGAGGATTTTGCTTGCATTCCAGGCTGTGAAGCAGTTACTGAGGTTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTCAATAAAGTGGGATCCATGAATGCTCCTGTGACCGACAGTGAGAAACTCATTTGTAATGTCTTAGAAGCTGAGCGCCAAACTATTAGTCAACTGCATGGGAAATCTCTGTTTGAGACAAATAACTCTTTCCTAGAAAAACATGAAGATTCTTTGACACACAGAGCTGCTTTTGGAGAAATGTTGTATATTTTGGATCCCAGCAGAAGGTCCGAGGCTGTCAAGTTGATTGAGGGGTCAGCAAATAATCTTGTGCCAAGAAATGGAGCGCTTGGACCAATCAGGGAATGGAAACTTAAAGATTGTATTTCAGTTCATAAACTTCTTGCAACAGTTCTTGTCGATCAGGATGCTGCATCAAGATGGAAAATGCGTTGTGCTGAGCTTTTCCCATACTCCACATACTTTGAGGGAATTTGCAGCTCTGCCTCTCCCAACTCTGCCTTTAACCAGATACGTAAGAGCACTGAAACTGGGAGTTCTAACCATTGGGTGGGTGATCACAATGCGGAATCCACATCAAATGGCAAACTAGAGGCATTCAAAGATCTCACTATCTGA 2703 0.4058 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADTILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAIEILEAYEGTLEDDYPPENEWCEHGEMLLYKISLLEECRFFQKALEELQKKELKIVDKLAYKEQEVLLLVKLGRLEEGEKLYRTLLSMNPDNYRYYEGLQKCVGLYSKNGHYSPDEIDRLDALYKTLGQQYKWSSAVKRIPLDFLQGDKFHEAADNYIRPLLTKGVPSLFSDLSSLYNQLGKADILEQIILEIESSIKTTSQYPGGMEKEPPSTLMWTLFLLAQHYDRRGQYEIALFKINEAIDHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGNLGMALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDSPPKSTAEEDNDMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSAGGISKSGKRQAKPIDPDPRGEKLLQVEDPLLEGTKYLKLLQKNSPDSVETHFLSFELYMRKQRILLAFQAVKQLLRLDAEHPDSHRCLIKFFNKVGSMNAPVTDSEKLICNVLEAERQTISQLHGKSLFETNNSFLEKHEDSLTHRAAFGEMLYILDPSRRSEAVKLIEGSANNLVPRNGALGPIREWKLKDCISVHKLLATVLVDQDAASRWKMRCAELFPYSTYFEGICSSASPNSAFNQIRKSTETGSSNHWVGDHNAESTSNGKLEAFKDLTI* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3684 900 Pfam TPR repeat 84 123 - -
Gso11g3684 900 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Gso11g3684 900 PIRSF NAT_A 1 818 IPR021183 -
Gso11g3684 900 MobiDBLite consensus disorder prediction 577 594 - -
Gso11g3684 900 Gene3D - 2 503 - -
Gso11g3684 900 Coils Coil 195 215 - -
Gso11g3684 900 SUPERFAMILY TPR-like 381 718 IPR011990 GO:0005515
Gso11g3684 900 MobiDBLite consensus disorder prediction 577 645 - -
Gso11g3684 900 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Gso11g3684 900 SUPERFAMILY TPR-like 131 435 IPR011990 GO:0005515
Gso11g3684 900 Gene3D - 505 725 - -
Gso11g3684 900 Coils Coil 596 620 - -
Gso11g3684 900 SUPERFAMILY TPR-like 17 260 IPR011990 GO:0005515
Gso11g3684 900 MobiDBLite consensus disorder prediction 606 622 - -
Gso11g3684 900 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Gso11g3684 900 SMART tpr_5 77 110 IPR019734 GO:0005515
Gso11g3684 900 SMART tpr_5 43 76 IPR019734 GO:0005515
Gso11g3684 900 SMART tpr_5 380 413 IPR019734 GO:0005515
Gso11g3684 900 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3684 Gso-Chr11 52467331 52480998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3684 K20792 - gmx:100818973 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0120 15 1041185 1054218 Gso11g3684 11 52467331 52480998 GST
Gso11g3684 11 52467331 52480998 Gso8g1727 8 16865580 16879296 PCT
Gso8g1727 8 16865580 16879296 Gso11g3684 11 52467331 52480998 PCT