Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0113 ATGCCTTCACTCTCAGAAGCCTACCGATCCCACCCCGTGCACGTTCAACACAAGCACCCTGACTTAAACTCCCTACAAGAACTCCCCGAGTCTTACACTTGGACACACCATGGCCATGATGATCACACTAATTCCCCTGCTTCCAACGAGAGTGTCCCCGTTATTGATCTCAATGACCCAAATGCTTCAAAGTTGATACACCATGCATGCACAACTTGGGGAGCGTACCAAGTGCTGAACCATGGCATACCCATGAGCCTCCTCCAAGACATTCAATGGGTTGGGGAGACCCTATTCTCTCTCCCTTCTCACCAAAAACACAAAGCAGCTCGTTCCCCTGACGGTGTTGATGGCTATGGCCTCGCTCGCATCTCTTCCTTCTTCCCCAAACTCATGTGGTCTGAAGGCTTCACAATTGTTGGATCCCCTCTTGAGCATTTTCGCCAACTCTGGCCCCAAGATTACGACAAATACTGTGATTTCGTCATGCAATATGACGAAGCCATGAAAAAGCTAGTGGGAAAGCTGATGTTGCTCATGTTGGATTCTCTGGGTATTACAAAGGAAGACCTTAAATGGGCTGGCTCAAAAGGCCAATTCGAAAAGACTTGTGCTGCCTTGCAATTGAATTCATACCCGACTTGTCCGGATCCGGATCGGGCCATGGGTCTAGCCGCCCACACCGACTCCACCCTTCTCACAATCCTTTACCAAAACAACATAAGCGGGTTGCAGGTTCACCGAAAAGGCGTCGGGTGGGTGACGGTGCCACCACTCTCCGGCGGACTTGTGATCAATGTAGGCGACCTCCTCCACATATTGTCGAACGGGTTGTACCCGAGTGTGCTCCACCGGGTCTTAGTGAACCGGATCCAGCGAAGGCTTTCAGTTGCGTATTTATGTGGGCCCCCTCCAAATGTGGAGATATGTCCACATGCGAAGTTAGTGGGCCCAAATAAGCCTCCCCTTTATAAGGCAGTGACTTGGAATGAGTACCTTGGGACCAAAGCAAAGCATTTTAACAAGGCACTCTCAACTGTTCGGCTTTGTGCACCTAGCTAG 1062 0.5047 MPSLSEAYRSHPVHVQHKHPDLNSLQELPESYTWTHHGHDDHTNSPASNESVPVIDLNDPNASKLIHHACTTWGAYQVLNHGIPMSLLQDIQWVGETLFSLPSHQKHKAARSPDGVDGYGLARISSFFPKLMWSEGFTIVGSPLEHFRQLWPQDYDKYCDFVMQYDEAMKKLVGKLMLLMLDSLGITKEDLKWAGSKGQFEKTCAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNNISGLQVHRKGVGWVTVPPLSGGLVINVGDLLHILSNGLYPSVLHRVLVNRIQRRLSVAYLCGPPPNVEICPHAKLVGPNKPPLYKAVTWNEYLGTKAKHFNKALSTVRLCAPS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0113 353 SUPERFAMILY Clavaminate synthase-like 16 340 - -
Gso15g0113 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 152 IPR026992 -
Gso15g0113 353 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 341 - -
Gso15g0113 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 341 - -
Gso15g0113 353 MobiDBLite consensus disorder prediction 1 54 - -
Gso15g0113 353 Gene3D - 15 334 IPR027443 -
Gso15g0113 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 303 IPR005123 -
Gso15g0113 353 Pfam 2OG-Fe(II) oxygenase superfamily 207 303 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0113 Gso-Chr15 969454 971481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0113 47 344 Glycosyltransferase AT5G59530 30.435 1.09e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0113 K04124 - gmx:100798572 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0113 15 969454 971481 Gso11g3690 11 52538780 52540910 GST
Gso15g0113 15 969454 971481 Gso8g1732 8 16947332 16949497 PCT
Gso8g1732 8 16947332 16949497 Gso15g0113 15 969454 971481 PCT