Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3690 ATGCCTTCACTCTCAGAAGCCTACCGAGCCCACCCCGTGCACGTTCAACACAAGCACCCTGACTTAAACTCCCTACAAGAACTCCCCGAGTCTTACACTTGGACACACCATAGCCATGATGATCATACTCCTGCAGCTTCCAACGAGAGTGTCCCCGTTATTGATCTCAACGACCCAAATGCTTCAAAGTTGATACACCATGCATGCATAACTTGGGGAGCGTACCAAGTGGTGAACCATGCCATACCCATGAGCCTCCTCCAAGACATTCAATGGGTTGGGGAGACACTCTTCTCTCTCCCTTGTCACCAAAAACAAAAAGCAGCTCGTTCCCCTGACGGTGCTGATGGCTATGGCCTTGCTCGCATCTCTTCCTTCTTCCCCAAACTCATGTGGTCTGAGGGATTCACAATTGTTGGATCCCCTCTTGAGCATTTTCGTCAACTCTGGCCCCAAGATTACCACAAATACTGTGATATCGTCAAGCGATATGATGAAGCGATGAAAAAGCTAGTGGGAAAGCTGATGTGGCTGATGTTGGATTCTCTGGGTATTACAAAGGAAGACCTGAAATGGGCCGGGTCCAAAGGCCAATTCAAAAAGACATGCGCAGCCTTGCAATTGAACTCTTACCCGACTTGTCCGGATCCGGATCGGGCCATGGGTCTGGCCGCCCACACCGACTCCACCCTTCTCACAATCCTTTACCAAAACAACATAAGCGGGTTGCAGGTTCACCGAAAAGGCGGCGGGTGGGTGACGGTGGCACCAGTCCCCGAAGGGCTTGTGATCAATGTAGGCGACCTCCTCCACATATTGTCGAACGGGTTGTACCCGAGTGTGCTCCACCGGGTCTTAGTGAACCGGATCCAGCAAAGGCTTTCAGTTGCGTATTTATGTGGGCCCCCTCCGAATGTGGAGATATGTCCACATGCGAAGCTAGTGGGCCCAAATAAGCCTCCCCTTTATAAGGCAGTGACTTGGAATGAGTACCTTGGCACTAAAGCAAAGCATTTCAACAAGGCACTCTCAAACGTTCGGCTTTGTGCACCTAGCTAG 1059 0.5109 MPSLSEAYRAHPVHVQHKHPDLNSLQELPESYTWTHHSHDDHTPAASNESVPVIDLNDPNASKLIHHACITWGAYQVVNHAIPMSLLQDIQWVGETLFSLPCHQKQKAARSPDGADGYGLARISSFFPKLMWSEGFTIVGSPLEHFRQLWPQDYHKYCDIVKRYDEAMKKLVGKLMWLMLDSLGITKEDLKWAGSKGQFKKTCAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNNISGLQVHRKGGGWVTVAPVPEGLVINVGDLLHILSNGLYPSVLHRVLVNRIQQRLSVAYLCGPPPNVEICPHAKLVGPNKPPLYKAVTWNEYLGTKAKHFNKALSNVRLCAPS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3690 352 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 340 - -
Gso11g3690 352 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 340 - -
Gso11g3690 352 Pfam 2OG-Fe(II) oxygenase superfamily 206 302 IPR044861 -
Gso11g3690 352 Gene3D - 15 333 IPR027443 -
Gso11g3690 352 MobiDBLite consensus disorder prediction 1 22 - -
Gso11g3690 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 151 IPR026992 -
Gso11g3690 352 MobiDBLite consensus disorder prediction 34 53 - -
Gso11g3690 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 302 IPR005123 -
Gso11g3690 352 SUPERFAMILY Clavaminate synthase-like 16 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3690 Gso-Chr11 52538780 52540910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3690 25 348 Glycosyltransferase AT5G59530 27.966 2.60e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3690 K04124 - gmx:100776755 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0113 15 969454 971481 Gso11g3690 11 52538780 52540910 GST
Gso11g3690 11 52538780 52540910 Gso8g1732 8 16947332 16949497 PCT
Gso8g1732 8 16947332 16949497 Gso11g3690 11 52538780 52540910 PCT