Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1483 ATGTCAATTTCCTCCACTTCCAACTCCCTCATTCCCCCCAAATCTTTAATCCCCCAATCCCACCCCCTCATTCCCAACATCAGGCCCGGGCTCCGGCCCAAGCCTGGCCCATCCCCTTCCATCCTCGCCGTCCACGCCGCCGAGCCCGCCAAAAACCCCGTCGTCACCGACAAGCCCAAGCCCCAAGCCCAACAATCTCCATCCCCGGCCGCGGCCCGGGCAACCAAATGGGCCGTGGACAGCTGGAAGTCCAAGAAGGCCCTGCAGCTGCCCGAATACCCCAACCAGGAGGATCTCGAGTCCGTCCTCCGCACCCTCGACGCCTTCCCTCCCATCGTCTTCGCTGGCGAGGCCCGGACGCTCGAGGAGCACCTCGCCGAGGCCGCCATGGGAAATGCCTTCCTCCTCCAGGGCGGAGACTGTGCCGAGAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGCATCATCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAATGCCCGTCATCAAGGTGGGGAGAATGGCGGGGCAATTTGCGAAGCCGAGGTCGGATTCGTTTGAGGAGAAGAACGGCGTGAAGCTTCCGAGTTACAGAGGGGACAACATTAACGGAGACTCCTTTGACGAGAAGTCGAGGATTCCGGATCCGCAGAGGATGATTAGGGCTTATTGCCAAGCCGCGGCGACGCTGAATCTTCTCAGAGCTTTCGCCACCGGTGGTTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACGGATCACAGCGAACAGGGAGATAGGTACCGAGAGCTTGCTAACCGAGTTGATGAGGCTCTTGGATTCATGGCTGCTGCTGGGCTCACAGTGGACCATCCCATAATGAGAACAACTGAATTCTGGACATCTCATGAGTGCTTATTGTTGCCTTATGAACAATCCCTCACCAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGTTCAGCCCATATGCTCTGGGTTGGGGAACGAACCAGGCAGCTTGATGGTGCCCATGTCGAGTTTCTAAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTAAGTGACAAGATGGATCCAAATGAGCTTGTTAGACTCATTGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACTGTGATTACGAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTCATCAGGGCAGTGCGCAGAGCAGGGCAAATTGTCACCTGGGTCAGTGATCCTATGCATGGAAACACCATTAAGGCTCCATGTGGTCTTAAAACTCGCCCCTTCGATTTCATCAGGGCTGAAGTGAGAGCATTCTTTGATGTGCACGAGCAAGAAGGAAGCCACCCAGGAGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACCGAGTGCATTGGTGGGTCAAGGACGGTCACATTTGATGACTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTGCCGAGCGTTTGAGAAAGAGCAGGATCAGATCGCAGCAACCTCTTGCCCCTCTAGGAGTGTAA 1599 0.5416 MSISSTSNSLIPPKSLIPQSHPLIPNIRPGLRPKPGPSPSILAVHAAEPAKNPVVTDKPKPQAQQSPSPAAARATKWAVDSWKSKKALQLPEYPNQEDLESVLRTLDAFPPIVFAGEARTLEEHLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDSFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTDHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDFIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQQPLAPLGV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1483 532 Pfam Class-II DAHP synthetase family 77 513 IPR002480 GO:0003849|GO:0009073
Gso14g1483 532 MobiDBLite consensus disorder prediction 1 73 - -
Gso14g1483 532 MobiDBLite consensus disorder prediction 1 15 - -
Gso14g1483 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 5 528 IPR002480 GO:0003849|GO:0009073
Gso14g1483 532 Gene3D Aldolase class I 266 518 IPR013785 -
Gso14g1483 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 5 528 - -
Gso14g1483 532 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 77 519 IPR002480 GO:0003849|GO:0009073
Gso14g1483 532 SUPERFAMILY Aldolase 66 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1483 Gso-Chr14 46015708 46020314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1483 K01626 - gmx:100797019 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1483 14 46015708 46020314 Gso2g1777 2 41463345 41467937 GST
Gso14g1483 14 46015708 46020314 Gso4g0855 4 9142858 9147145 PCT
Gso14g1483 14 46015708 46020314 Gso6g0852 6 8108685 8113509 PCT
Gso4g0855 4 9142858 9147145 Gso14g1483 14 46015708 46020314 PCT
Gso6g0852 6 8108685 8113509 Gso14g1483 14 46015708 46020314 PCT