Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0487 ATGACAAACACCGAAGAAGAAGAAGCAACTCCTCCGAACCCTAAGAATTACACTCAACACTCCACCAACGACGATGTGGAACCTCGTGACGACGAAGACATCGAAGAAGACCAAGAAAACGATGAAGACGACGTCGTTCAGGAACCGAATCGCGGAATTCCCCAATCTGCAGCGTCCAAGTTGCGGGAACAGCGTTTCAAGGTGGAAACCCTATCGCGGCGCTTGTCGTCGGAGCTGGTTCCGATCCGAGTCCACGACGTGGTCATAAACGGCAACACGAAGACGAAGGATTGGGTGATTGAAGCGGAGCTGAAAGGCATCGAGAACGCCACCAGCATGCAGGAGCTTATGCAAGCTTCGCAAATCGCCATTGCCAAGCTTCAGGGTCTCGAAATCTTCGATTCCTGCATGGTTCGCCTCGAGGCTGGACCACGAGAGCTTCCAAACACTGCCAATGTCATCGTCGACGTTGTCGAAACCGATAACAAAGTTTCCGGCGAATTCGGCATTTATACCAAACCCTCGACTAGTTCGTGGACTGCTGAAGGTGCTCTTAAGTATAAGAACTTGTTGGGTTATGGTGATCTATGTGATGCTTCTTTGGCCTATGGTGCCAACCAAGCGACTGAGGTGAGTGTAGGGGTGTATGCCCCTCGAGTTAAAGGATTTTTGACTCCTATTGTAACACGGATATCCATGCTTTCCCAAGATTGGCAGGAGTCTTCCTCATATAAGGAGCGGTTGTTGGGTGCGTATCTTGGCTTAATCTCAACAAAGCACCATGACTTAGCATACACCCTTGGATGGCGTACCTTAACAGATCCGTCAAAGATGTCATCCAGGTCTATAAGGAGGCAGCTTGGGCATGGTTTAGTGTCATCTTTGAAGTATACATTTAAAATTGATAGGAGAAATTCTACTATTAGGCCAACAAAAGGATATGTTTTTCTTTCCACCACTCATGTTGGTGGCCTTACACTGGACCCCAGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGCTTTTCTGTCCCTTTTGGGTTTTACAATACTGCACTAAACCTTGGGATATCTGCTGGTGCTGTTTTTCCATGGGGGAATGGATTCAAAACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACCCTAGGAGGACCAACAACATTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCTCGGAGGCAAAATAGAGATGGGTCTAATGATGACAATGTTGATTCCTCTGGATGGGACTTCATTGGTGGTGATTTTGCTGTTACTGCTTTTGCAGATCTCTCTTTTGATCTTCCAATTATGTGGTTGAGAGAACATGGAATCCACGGACATGTTTTTGCAGGTTCTGGGAATGCTGCTAAATTAACTAAGAATGAATATAAGCACTTCTCTCCTCGGAAGTTCTTAGAATCCTTTCGAATGTCAGTAGGATGTGGAGTAGTTATTCCTACTAGACTCTTCCGCTTAGAGGGTAACTACTTTTACATACTCAGAAAGGGTGAGCATGATCGTGGGAAGACTGGGTTTAGGTTTAGCTTCTCAGCGCCTTCATAG 1608 0.4633 MTNTEEEEATPPNPKNYTQHSTNDDVEPRDDEDIEEDQENDEDDVVQEPNRGIPQSAASKLREQRFKVETLSRRLSSELVPIRVHDVVINGNTKTKDWVIEAELKGIENATSMQELMQASQIAIAKLQGLEIFDSCMVRLEAGPRELPNTANVIVDVVETDNKVSGEFGIYTKPSTSSWTAEGALKYKNLLGYGDLCDASLAYGANQATEVSVGVYAPRVKGFLTPIVTRISMLSQDWQESSSYKERLLGAYLGLISTKHHDLAYTLGWRTLTDPSKMSSRSIRRQLGHGLVSSLKYTFKIDRRNSTIRPTKGYVFLSTTHVGGLTLDPRSLRFLRQEFDVRFSVPFGFYNTALNLGISAGAVFPWGNGFKTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQNRDGSNDDNVDSSGWDFIGGDFAVTAFADLSFDLPIMWLREHGIHGHVFAGSGNAAKLTKNEYKHFSPRKFLESFRMSVGCGVVIPTRLFRLEGNYFYILRKGEHDRGKTGFRFSFSAPS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0487 535 MobiDBLite consensus disorder prediction 1 62 - -
Gso14g0487 535 MobiDBLite consensus disorder prediction 28 44 - -
Gso14g0487 535 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 167 533 - -
Gso14g0487 535 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 9 533 - -
Gso14g0487 535 MobiDBLite consensus disorder prediction 1 21 - -
Gso14g0487 535 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 9 533 IPR039910 -
Gso14g0487 535 Gene3D membrane protein fhac 81 160 - -
Gso14g0487 535 Pfam Omp85 superfamily domain 189 532 IPR000184 GO:0019867
Gso14g0487 535 MobiDBLite consensus disorder prediction 404 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0487 Gso-Chr14 4615712 4619807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0487 K07277 - gmx:100776589 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0223 18 1912483 1917342 Gso14g0487 14 4615712 4619807 PCT
Gso13g1398 13 29514395 29519074 Gso14g0487 14 4615712 4619807 PCT
Gso14g0487 14 4615712 4619807 Gso18g0223 18 1912483 1917342 PCT
Gso14g0487 14 4615712 4619807 Gso13g1398 13 29514395 29519074 PCT