Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1829 ATGTCCCTTCCAGCTTCAACACTTGCTTCAACTCAACATGCAGTATTTGACATCAAGCGACCTATTACAAGATATGCTCCTAGCATGTGGGGAGATACTTTCCTTCAATATGCTTCTGAATCTAAGGAAGTCAGTGAAAATGTGAAGCAACAAGCTGATATACTAAAAGAGGAGGTGAAAATGATGTTTCAATCGTCAAATCAAAATATCATGCAAAAATTAAACTTCATTGACTCAATCCAACGTTTCGGGATATCCTATCATTTCCAAGAAGAGATTAACGAAACATTAGAACAAATTCACAACACTTTTACCAAAAATAACACCATTATCATCAGTGAAGATAGCAATCATCACTTTCTCGCTCTACTCTTTCGTTTGCTCAGGCAACAAGGATATCAAATTTCATCAAATGTATTTAACAAATTCAAAAATGATCAAGGAAAGTTCTATGAAGCACTTGCCAATGATATTCAAGGGTTGTGCAGTTTATATGAAGCTGCACATTTAAGAACTCACAAAGATGCTATACTAGAAGAAGCATGTGACTTTTCAAATACTCAACTTAAGTCCTTGGCGGACAAACTGAGCCCATCTATTGCTACACAAATCAATCATTGCTTAAGACAACCTTTTAACAAGAGTGTACCTAAGTTCGAGGCAAGGTATCACATGACTCTCTATGAACAAGATCCTTCTCATAACAAAACTCTGCTAACCTTTGCGAGAGTAGATTTCAATATTCTTCAAAAAATGCATGAAAAAGAGATTGGCATTATAACCAAGTGGTGGAAAAAATCAAATATTGTGAAAAAGGTGCCTTATGCTAGAGATAGGTTAGTTGAGAGCTATCTTTGGGCATTAGCATTTTCCAGCCAGCCTGGATACAACAAAGCAAGAATGTTTGAAGGAAAATTGATTGCTCTTGCCACTATTCTAGATGATACTTATGATGCTTATGGGACTATTCAAGAACTTGAACTCTTCACAGAAGCAATTCAAAGATGGGATATCAGTCCCATTGAATCCCTTCCAGAATGCATGAAAGTAGTTTTTGAAACAATTCTAGAGTTGTGTGAAGAAATAAAGTTGGAGACACCTGAGAGTGGAAAATCAAGCTTTGTGGTTCCGCGTTTTAAACAAGCTATTTGTAAATTAGTAAAAGGTTACATGGTTGAAGCAAAATGGTGCCAAGAGGGTTTCGTTCCAACATATGATGAGTATAAAATTAATGGCATCTTAACTTCTATTTTCATTCCTTTAACGATATCCTTTATTGGACTCGGAGAATTTGCAACAAAGGATGTGTTTGATTGGTTTTTCAATGATCCAAAGATCGTTGAAGCTGTATCAATTATTAGCAGAGTCTTGAATGACACATCATCGCATAAGTTTGAGCAGCAACGAGTTCATGTTGCCTCAGCTGTGGAATGTTGCATGAAGCAATACAATATTTCGCAAGCAGAGGCTTATAACTTCATTCGCAAGGACGTTGAAGATTATTGGAAGGTTATAAATGAAGAGTGCCTCAAGTTAAATGATATCCCAAAGTCTGTGCTTGAAATTGTAGTTAATTATGCACGTGCATCAGAAGTTACATATGGAAATCATCAGGATAAATTCACAAATGCGGATTTACTGAAGGATTACATCTCTTCACTGCTTTTGGATCCCATGTGCATCAATGAACATTAA 1695 0.3617 MSLPASTLASTQHAVFDIKRPITRYAPSMWGDTFLQYASESKEVSENVKQQADILKEEVKMMFQSSNQNIMQKLNFIDSIQRFGISYHFQEEINETLEQIHNTFTKNNTIIISEDSNHHFLALLFRLLRQQGYQISSNVFNKFKNDQGKFYEALANDIQGLCSLYEAAHLRTHKDAILEEACDFSNTQLKSLADKLSPSIATQINHCLRQPFNKSVPKFEARYHMTLYEQDPSHNKTLLTFARVDFNILQKMHEKEIGIITKWWKKSNIVKKVPYARDRLVESYLWALAFSSQPGYNKARMFEGKLIALATILDDTYDAYGTIQELELFTEAIQRWDISPIESLPECMKVVFETILELCEEIKLETPESGKSSFVVPRFKQAICKLVKGYMVEAKWCQEGFVPTYDEYKINGILTSIFIPLTISFIGLGEFATKDVFDWFFNDPKIVEAVSIISRVLNDTSSHKFEQQRVHVASAVECCMKQYNISQAEAYNFIRKDVEDYWKVINEECLKLNDIPKSVLEIVVNYARASEVTYGNHQDKFTNADLLKDYISSLLLDPMCINEH* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1829 564 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 559 - -
Gso12g1829 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 234 IPR008930 -
Gso12g1829 564 Pfam Terpene synthase, N-terminal domain 29 208 IPR001906 GO:0010333|GO:0016829
Gso12g1829 564 Gene3D - 68 234 IPR036965 GO:0010333|GO:0016829
Gso12g1829 564 CDD Terpene_cyclase_plant_C1 20 558 IPR044814 GO:0010333|GO:0016102
Gso12g1829 564 Gene3D Farnesyl Diphosphate Synthase 27 545 IPR008949 -
Gso12g1829 564 PANTHER OS04G0344100 PROTEIN-RELATED 2 559 - -
Gso12g1829 564 SUPERFAMILY Terpenoid synthases 234 559 IPR008949 -
Gso12g1829 564 SFLD Isoprenoid Synthase Type I 234 559 - -
Gso12g1829 564 Coils Coil 38 58 - -
Gso12g1829 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 559 IPR034741 -
Gso12g1829 564 Pfam Terpene synthase family, metal binding domain 239 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1829 Gso-Chr12 41977177 41981803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1829 K15803 - gmx:100794444 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1829 12 41977177 41981803 Gso11g3034 11 46225280 46228383 GST
Gso12g1829 12 41977177 41981803 Gso12g1144 12 16746451 16751372 PCT