Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3034 ATGTCCCTTCCAGCTTCAACACTTGCCTCAATTCAACATGCAGTATCTGACCAGCTCAAGCGACCTTGCGTGAGTTTTGCTCCTTGCATATGGGGAGATACTTTCCTTGAATATGCTTCTCAATTTGAGGGAGTCAATGATGACGAGAAGCAGCAAGCTCAAACACTAAGGAATGAGGTGCAAACGATGTTTCAATCATCAATCGATCAAAATATCATACAAAAATTAAACTTGATTGACTCAGTCCAACGTTTCGGTGTATCCTATCATTTCCAACAAGAAATCAATCAAGCATTGGAACAAATTCACAACAGTTTCACAAAAAATAACACCATCAGTGATGATGGCAATCATCACTCTCTTGCTCTACTCTTTCGTTTGCTTAGACAGCAAGGATATCAAATTTCATCAAGTGCATTTAACAAATTCAAAAATGATCAAGGAAACTTTAGTGAAACACTTGCTAATGATATTCAAGGGTTGTGTAGCTTGTATGAAGCTGCACATCTAAGAACTCCCGAAGATGACATATTGGAGGAAGCATGTGACTTCTCAAATACTCACATGAAGTCCTTGGCCAACCAATTAAGCCCATCTCTTGCAGCACAAATCAATCACTGCTTAAGACTACCTCTTAACAAGAGTTTAATTAGGTTCGAGGCAAGGTGTCACATGAATCTCTATGAAAAAGATGCATCTCATAACAAAACTCTACTAACCTTTGCAAAAGTAGATTTCAATATTCTTCAAAAACTACATCAAAAAGAAATTAGCACTATCACCAAGTGGTGGAAAAAGTCAAACTTTGAGACTAAGGTCCCTTACGCTAGAGGTAGGTTGGTTGAGGCCTACCTTTGGTCATTGGCTATGTCCTACAAACCTGAACACAGCCTCGCAAGAATGTTTGTGGGAAAATTGATTGCTGTTGTTTGTCTTCTAGACGATACTTATGATGCTTATGGCACTATTCAAGAACTTGAGCTATTCACAGAAGCAATTCAAAGATGGAATAAGAGTCCCATTGAATCTCTTCCACAATGCATGAAAGTAGTATTTGATACAGTTGTAGAACTGGGTGAAGAAATAGAATTGGCGACAACGGAGAGTGGGAAATCAAGCTTTGTAGTGCAATATTTTAAACAAGCTGTTTTTAACTTAATAAAAGGCTACATGGCTGAGGCAAAATGGTGTCACGAGGGTTACATTCCAACATATGATGAATATAAAGTTAATGGAATTTTGACTTCTTGTTTCCCTCTTTTCATTACATCATTTATTGGCTTGGGAGAATTTGCAAACAAAGATGTGTTTGATTGGATTTTTAGTGATCCAAATATCATTAAAGTGGTATCAATTATTGGTAGAGTATTGGACGACATGGGCTCACATAAGTTTGAGCAACAAAGAGTACATGTTGCCTCAGCTGTGGAATGTTGCATGAAGCAATATAACATTTCACAAGCAGAGGCGTACCACCTTATCCATAATGACGTTGAAGATGGTTGGAAGGTTATAAATGAAGAGTGCCTTAAGTCAAATGACATCCCAAAATCTGTGCTTGATTGTGTAGTTAATTTGGCACGCATGTCTATGGTTTCATATGAAAACCACCAGGATAAATTCACTAATGGAGAACTACTGAAAGGTTATGTGTCTTCATTGCTTATGGATCCCATGTGCCTTGAACAACACCAGTAG 1698 0.3793 MSLPASTLASIQHAVSDQLKRPCVSFAPCIWGDTFLEYASQFEGVNDDEKQQAQTLRNEVQTMFQSSIDQNIIQKLNLIDSVQRFGVSYHFQQEINQALEQIHNSFTKNNTISDDGNHHSLALLFRLLRQQGYQISSSAFNKFKNDQGNFSETLANDIQGLCSLYEAAHLRTPEDDILEEACDFSNTHMKSLANQLSPSLAAQINHCLRLPLNKSLIRFEARCHMNLYEKDASHNKTLLTFAKVDFNILQKLHQKEISTITKWWKKSNFETKVPYARGRLVEAYLWSLAMSYKPEHSLARMFVGKLIAVVCLLDDTYDAYGTIQELELFTEAIQRWNKSPIESLPQCMKVVFDTVVELGEEIELATTESGKSSFVVQYFKQAVFNLIKGYMAEAKWCHEGYIPTYDEYKVNGILTSCFPLFITSFIGLGEFANKDVFDWIFSDPNIIKVVSIIGRVLDDMGSHKFEQQRVHVASAVECCMKQYNISQAEAYHLIHNDVEDGWKVINEECLKSNDIPKSVLDCVVNLARMSMVSYENHQDKFTNGELLKGYVSSLLMDPMCLEQHQ* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3034 565 Pfam Terpene synthase family, metal binding domain 239 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso11g3034 565 SFLD Isoprenoid Synthase Type I 234 559 - -
Gso11g3034 565 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 560 - -
Gso11g3034 565 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 234 IPR008930 -
Gso11g3034 565 Coils Coil 39 59 - -
Gso11g3034 565 Gene3D - 70 234 IPR036965 GO:0010333|GO:0016829
Gso11g3034 565 SUPERFAMILY Terpenoid synthases 234 559 IPR008949 -
Gso11g3034 565 PANTHER OS04G0344100 PROTEIN-RELATED 2 560 - -
Gso11g3034 565 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 559 IPR034741 -
Gso11g3034 565 Pfam Terpene synthase, N-terminal domain 30 208 IPR001906 GO:0010333|GO:0016829
Gso11g3034 565 CDD Terpene_cyclase_plant_C1 21 558 IPR044814 GO:0010333|GO:0016102
Gso11g3034 565 Gene3D Farnesyl Diphosphate Synthase 28 544 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3034 Gso-Chr11 46225280 46228383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3034 K15803 - gmx:100781367 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1829 12 41977177 41981803 Gso11g3034 11 46225280 46228383 GST
Gso11g3034 11 46225280 46228383 Gso12g1144 12 16746451 16751372 PCT