Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1604 ATGGAGGCAACGAGAGTGAACACAACAGGATGGGATGGAGGCAAAGTTATTGTCTATCACAAGCGGAGGCAACGACGACAGGATGGGATTCTCGACGGCATTAGGGTGATGTCATGCACGACTGATGTAAACTATGCTGTGAAGGTGTCTGGAATTGAAATTACACCAGACCCTGTTGTGCGTGCTAGGCCTGCCACCTTTAAGATTTCAGCTGCTACTGGTGAAGCTATTTATGGAGGAAAGTGGGTAACTGCAGTTGCATACTTCGGTTTTGTTGTCCTCAAAGAAATCCATGATTTTTGTGAGGAAATATCATGTCCTGTTGCTACTGGCAGTTTTGTGGCTGCTCACACCCAAAAATTGCCTGCATTTGCCCCACCAGTTAGTTTCAATTTACCATATATAATCTTTTAG 414 0.4469 MEATRVNTTGWDGGKVIVYHKRRQRRQDGILDGIRVMSCTTDVNYAVKVSGIEITPDPVVRARPATFKISAATGEAIYGGKWVTAVAYFGFVVLKEIHDFCEEISCPVATGSFVAAHTQKLPAFAPPVSFNLPYIIF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1604 137 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 1 132 IPR039670 -
Gso12g1604 137 Pfam ML domain 36 131 IPR003172 -
Gso12g1604 137 SUPERFAMILY E set domains 35 129 IPR014756 -
Gso12g1604 137 Gene3D - 33 136 - -
Gso12g1604 137 SMART pgtp_13 36 137 IPR003172 -
Gso12g1604 137 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1604 Gso-Chr12 39574174 39575461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1604 - - gsj:114379018 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1604 12 39574174 39575461 Gso11g3250 11 48305013 48307351 GST
Gso12g1604 12 39574174 39575461 Gso12g0781 12 8079419 8084336 PCT
Gso12g1604 12 39574174 39575461 Gso11g1317 11 14508323 14515579 PCT
Gso12g0781 12 8079419 8084336 Gso12g1604 12 39574174 39575461 PCT
Gso11g1317 11 14508323 14515579 Gso12g1604 12 39574174 39575461 PCT