Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1317 ATGGAATTTCAGTTTCTTCCCAGATTCTACCTTCTTGTTTCCTTATCCATTCTGTTCCTTGCACCCTTTCACGCTCAAGCTAAAATTAAAGTGACTTACTGCGATAAGAAGGCAGACTATGCTGTGAAGGTGTCTGGAGTTGAAATATCACCAAACCCTGTGGTGAGTGGCCAGGCGGCTACCTTTAAGATCTCAGCAACTTCTGGTAAAGCTATTTATGGTGGAGAGGTGGTAATTGGAGTTTCATACGTTGGGGTGCCAGTCCATACTGAAAGAATTGATCTTTGTGAAGAAGTAACCTGTCCTGTTGCTAATGGCAATTTTCTGATTTCTCACACCCAAACATTGCCTGCAATTACTCCACCGGGACCCTACTCTCTGAAGATGACATTGAAGGATGATCGGGAGGAGGTGTTAACTTGCGTTAAGTTTAATTTTAAAATTGTTTTTGGATCTTTTGTGTCTGATATGTAA 474 0.4156 MEFQFLPRFYLLVSLSILFLAPFHAQAKIKVTYCDKKADYAVKVSGVEISPNPVVSGQAATFKISATSGKAIYGGEVVIGVSYVGVPVHTERIDLCEEVTCPVANGNFLISHTQTLPAITPPGPYSLKMTLKDDREEVLTCVKFNFKIVFGSFVSDM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1317 157 Gene3D - 27 151 - -
Gso11g1317 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 7 156 IPR039670 -
Gso11g1317 157 SMART pgtp_13 31 146 IPR003172 -
Gso11g1317 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Gso11g1317 157 SUPERFAMILY E set domains 29 149 IPR014756 -
Gso11g1317 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 7 156 - -
Gso11g1317 157 Pfam ML domain 29 148 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1317 Gso-Chr11 14508323 14515579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1317 - - gmx:100500637 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1317 11 14508323 14515579 Gso11g1317 11 14508323 14515579 ECH
Gso12g0781 12 8079419 8084336 Gso11g1317 11 14508323 14515579 GST
Gso12g1604 12 39574174 39575461 Gso11g1317 11 14508323 14515579 PCT
Gso11g3250 11 48305013 48307351 Gso11g1317 11 14508323 14515579 PCT
Gso11g1317 11 14508323 14515579 Gso12g1604 12 39574174 39575461 PCT
Gso11g1317 11 14508323 14515579 Gso11g3250 11 48305013 48307351 PCT