Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3250 ATGGAGTTTCAGTTTCAGCCAAAGCTCAACCATCTTTTATGCTTATTCATCCTTATCCTTTCATCTGTCCACGCTCAAGCTACTAGCTTCAGATACTGCGCTGATGTAAACTATGCTGTGAAGGTATCTGGAATTCAAATTACTCCAGACCCTGTTGTGCGTTCTAGGCCTGCCACCTTTAAGATTTCAGCTGCCACTGGTGAAACTATTTATGGAGGAAAGTGGCTAACTACAGTTGCATACTTCGGCTTTGTTGTCCACACAGAAATCCATGATTTTTGTGAGGAAATATCATGTCCTGTTGCTACTGGCAGTTTTGTGGCTTCTCACACCCAAAAATTGCCTGCATTTGCCCCACCGGGCACCTACACCGTGGAGATGACACTAAAAAATGAGAAGAACGAGCCATTAACTTGCATCTCCTTTAAATTCAAAATCGTTTTTGGATCTTTTGTGCCTGATATCTGA 468 0.4252 MEFQFQPKLNHLLCLFILILSSVHAQATSFRYCADVNYAVKVSGIQITPDPVVRSRPATFKISAATGETIYGGKWLTTVAYFGFVVHTEIHDFCEEISCPVATGSFVASHTQKLPAFAPPGTYTVEMTLKNEKNEPLTCISFKFKIVFGSFVPDI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3250 155 CDD PG-PI_TP 30 144 IPR033917 GO:0032366
Gso11g3250 155 Pfam ML domain 28 146 IPR003172 -
Gso11g3250 155 SMART pgtp_13 30 144 IPR003172 -
Gso11g3250 155 Gene3D - 28 149 - -
Gso11g3250 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 1 150 IPR039670 -
Gso11g3250 155 SUPERFAMILY E set domains 27 147 IPR014756 -
Gso11g3250 155 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3250 Gso-Chr11 48305013 48307351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3250 - - gmx:100818265 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1604 12 39574174 39575461 Gso11g3250 11 48305013 48307351 GST
Gso11g3250 11 48305013 48307351 Gso12g0781 12 8079419 8084336 PCT
Gso11g3250 11 48305013 48307351 Gso11g1317 11 14508323 14515579 PCT
Gso12g0781 12 8079419 8084336 Gso11g3250 11 48305013 48307351 PCT
Gso11g1317 11 14508323 14515579 Gso11g3250 11 48305013 48307351 PCT