Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1588 ATGGTAATAAGCCTCGGAAAAGATGACCCCAGACGAGTTATTCACTCCTTTAAGGTGGGATTGGCACTAATATTGATTTCTATTTTGCAATATTTTCGTCCTTCATTCTATGCTTTTGGTGACAACATAATGTGGGCGGTTCTCACCGTGGTTCTTGTCTTAGAATTTTCTGTGGGTGCAACACTTGGAAAAGGTTTAAACAGGGTGTTGGCAACGGGTTTAGCTGGTGCTTTCGGTGTTTCAATCCGTAGAATAGCTAGTTTTTCTGGGGATAAAGGAAAGGCTGTATTGACTTCAATGTTTGTCTTTTTCATAGCTGGAACAGTGACATTTATGAGATTTTCACCGAGACTGAAGGCGAGTTACGATTATGGGTTGATTATATTTATATTGACCTTCTGCTTAGTGTCTCTTTCGGATAATACTGAAAATGAATTATTAGAAGTTGCCCAAGAGAGGTTATTAACGATAATCATTGGAAGTTGTATAGCTATTGTGGTATCTATTTGCATATGCCCCGTTTGGATTGGCCAGGATCTCCATAATCAAATTGCTGGCAATATTCAAAAGCTCGCTGATTTTTTGGAAGGCTTAAACAGCAATCTTTTGGTATTTGCATACGGGCCACTATAA 633 0.3886 MVISLGKDDPRRVIHSFKVGLALILISILQYFRPSFYAFGDNIMWAVLTVVLVLEFSVGATLGKGLNRVLATGLAGAFGVSIRRIASFSGDKGKAVLTSMFVFFIAGTVTFMRFSPRLKASYDYGLIIFILTFCLVSLSDNTENELLEVAQERLLTIIIGSCIAIVVSICICPVWIGQDLHNQIAGNIQKLADFLEGLNSNLLVFAYGPL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1588 210 Pfam Aluminium activated malate transporter 4 203 IPR020966 GO:0015743
Gso12g1588 210 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 199 - -
Gso12g1588 210 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1588 Gso-Chr12 39374844 39376742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1588 5 196 Miscellaneous Gene Families AT1G08440 54.167 6.04e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1588 - - gsj:114379017 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1588 12 39374844 39376742 Gso12g0771 12 7828812 7831678 PCT
Gso12g1588 12 39374844 39376742 Gso11g1342 11 15083147 15085970 PCT
Gso12g0771 12 7828812 7831678 Gso12g1588 12 39374844 39376742 PCT
Gso11g1342 11 15083147 15085970 Gso12g1588 12 39374844 39376742 PCT