Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1342 ATGGCATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGCTAGGTAGAGTATTAGCCTTGCCAAAAGTTGTTAAGGGGAAGGTGTTGAGCATCTGTAGGTTAACAAAAGAGATAGCACAAGATGATCCTAGAAAAGTGATTCATTCACTGAAAGTAGGACTTGCAATCTCACTTGTTTCTCTTTTCTATTACTATCAACCACTATATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTAGTGGTGGTTTTTGAGTACACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCTGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTAGCTAGCCTATCTGGTGCAACAGGGGAACCTATATTGATTGGCGCGTTTGTCTTTGTGCAAGCTGCCATAGCATCATTCATAAGGTTTTTTCCGAAAGTAAAGGCAAGATATGACTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTGTCTGGTTTTCGAGAGGTTGAAGTGTTGGAAATGGCACACAAGAGGCTATCAACCATATTCATAGGGGGTTCTGCTTGTGTGATGATTTCCATTTTTGTTTGTCCTGTGTGGGCTGGTGAAGAGTTCCACTATTCCATTGCTCACAAGTTGGAAATACTTGGCGATTTCTTGGAAGCTTTTGTACGTGTATACTTCAAGATATCAAAAGAAGGAGAATCTGAAGACAACAAAGGAGATTCTAAAGACAAGTCGTTTTTAGAAGGTTATAAGAAAGTTCTCAATTCCAAAAGTGTTGATGACTCTCTGGCCAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACTTATACCTCAAAGTTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAGATGCAAACATCAACTCTGATATCCAAGGTTCCCAAGAAATTCGTATCACCATCCAAGAGCAATGCTCAGAAATGTGTTTAGAAGCTAGCAAGGCCTTTAAGGAGCTAGGATCATCAATCAGAACAATGACTATGTCATCATCTTCAGACACACATGTTGCAAACGCAAAAGCTGCAGTTAAGAGCCTCAAGACATTGCTCCAATCAAGTTCATGGAAAGAAACAGACCTTCTATCACTCATACCAGCTGCAACAGTGGCTTCACTTCTGATTGATATTATTGAATTCACGGAGAAAATAGCAGATTCAGTGAATAACCTTGCCACCCTCACACATTTTGAAGTTGTAGATACAGATAAATCCACAACAAAAGCACAACAACCATCACAATCATCTCCACACTGTGAATGTGCTGAACCGGGTCCCAAGACTGATCATAATAGCCTCCAACTCGTTATTCTGATTGAGGACTCAGCGCTAGCTGTGTCAGATAGTGAAAAATCAAACAGAGTTTGA 1452 0.4125 MASPNTNQEKAGVLGRVLALPKVVKGKVLSICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGDFLEAFVRVYFKISKEGESEDNKGDSKDKSFLEGYKKVLNSKSVDDSLANFAKWEPGHGKFRFRHPWDLYLKVGALSRQCAYRMEALDANINSDIQGSQEIRITIQEQCSEMCLEASKAFKELGSSIRTMTMSSSSDTHVANAKAAVKSLKTLLQSSSWKETDLLSLIPAATVASLLIDIIEFTEKIADSVNNLATLTHFEVVDTDKSTTKAQQPSQSSPHCECAEPGPKTDHNSLQLVILIEDSALAVSDSEKSNRV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1342 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 436 - -
Gso11g1342 483 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 10 436 - -
Gso11g1342 483 MobiDBLite consensus disorder prediction 433 455 - -
Gso11g1342 483 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1342 Gso-Chr11 15083147 15085970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1342 27 421 Miscellaneous Gene Families AT1G08440 58.987 7.58e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1342 - - gmx:100813430 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1342 11 15083147 15085970 Gso11g1342 11 15083147 15085970 ECH
Gso12g0771 12 7828812 7831678 Gso11g1342 11 15083147 15085970 GST
Gso12g1588 12 39374844 39376742 Gso11g1342 11 15083147 15085970 PCT
Gso11g1342 11 15083147 15085970 Gso12g1588 12 39374844 39376742 PCT