Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0771 ATGACATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGCTAGGTCGAGTATTGGCCTTGCCAAAAGTTGTTAAGGGGAAGGTGTTGAGCATTTGTAGGTTAACAAAGGAGATAGCACAAGATGATCCTAGAAAAGTGATTCATTCACTAAAAGTAGGACTTGCAATCTCACTGGTTTCTCTATTCTACTACTATCAACCACTATATGAGAATTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTAGTGGTGGTTTTTGAGTATACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCTGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTAGCTAGCCTATCTGGTGCAACAGGGGAACCTATATTGATTGGAGCGTTTGTCTTCGTGCAAGCTGCCATAGCATCATTCATAAGGTTTTTTCCGAAAGTGAAAGCAAGATATGACTATGGGATGCTTATATTCATCTTGACTTTCTCTTTGATATCCGTGTCTGGTTTTCGAGAGGTTGAAGTGTTGGAAATGGCACACAAGAGGCTATCAACCATATTCATAGGGGGTTCTGCTTGTGTGATGATTTCCATTTTTGTTTGCCCTGTGTGGGCTGGTGAAGAATTCCACTATTCCATTGCTCACAAGTTGGAAATACTTGGCTATTTCTTGGAAGCTTTTGTACGTGTATACTTCAAGATGTCAAAAGAAGGAGAATCTGAAGACAACAAAGGAGATTCTAAAGACAAGTCGTTTTTAGAAGGCTATAAAACGGTTCTCAATTCCAAAAGTGTTGATGACTCTCTGGCCAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACCTATACCTCAAAGTTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAGATGCACACATCAACTCTGATATCCAAGGGTCCCAAGAAATGCGTTCCACCATCCAAGAGCAATGCTCAGAAATGTGTTTGGAAGCTAGCCAGGCCTTTAAGGAACTAGGATCATCAATCAGAACAATGACCATGCCATCATCTTCAGACACACATGTTGCAAACGCAAAAGCTGCAGTGAAGAGCCTCAAGACATTGCTCCAATCAAGTTCATGGAAAGAAACAGACCTTCTATCACTCATACCAGCTGCAACAGTGGCTTCACTACTGATTGATATAGTTGAATTCACGGAAAAAATAGCAGATTCAGTTAATAATCTTGCAACCCTCACACATTTTGAAGTTGTAGATACAGATAAATCCTCAACAAAACCACAACAACCATCACAATCATCTCCACACTGTGAATGTGTTGAACCGGGTCCCAAGACTGATAGCCTCCAACTCGTTATTCTAATTGAGGACTCAGCGCTAGCTGTGTCAGATAGTGAAAAATCGAACAGAGTTTGA 1446 0.4191 MTSPNTNQEKAGVLGRVLALPKVVKGKVLSICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGYFLEAFVRVYFKMSKEGESEDNKGDSKDKSFLEGYKTVLNSKSVDDSLANFAKWEPGHGKFRFRHPWDLYLKVGALSRQCAYRMEALDAHINSDIQGSQEMRSTIQEQCSEMCLEASQAFKELGSSIRTMTMPSSSDTHVANAKAAVKSLKTLLQSSSWKETDLLSLIPAATVASLLIDIVEFTEKIADSVNNLATLTHFEVVDTDKSSTKPQQPSQSSPHCECVEPGPKTDSLQLVILIEDSALAVSDSEKSNRV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0771 481 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
Gso12g0771 481 MobiDBLite consensus disorder prediction 431 446 - -
Gso12g0771 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 436 - -
Gso12g0771 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 10 436 - -
Gso12g0771 481 MobiDBLite consensus disorder prediction 431 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0771 Gso-Chr12 7828812 7831678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0771 27 479 Miscellaneous Gene Families AT2G27240 54.626 1.17e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0771 - - gmx:100816113 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0771 12 7828812 7831678 Gso11g1342 11 15083147 15085970 GST
Gso12g1588 12 39374844 39376742 Gso12g0771 12 7828812 7831678 PCT
Gso12g0771 12 7828812 7831678 Gso12g1588 12 39374844 39376742 PCT