Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1531 ATGAACATGTCAGATATGATATCTTGTTTCAACGAGAACGCAGTGAATGTGTCACACTCCTCATGTTCTAGCTACTCAAACAACGCTTGCATATCTCCAAGTGTTACACCTTCAACTCAAAATTCAGTGTCTTCTGTCTACAAAACCACCCTCTCAAACCAAAAGCAGCTTCTGATCACAGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCAACGTAACCTTCGGCGAAGAGAACAACAACCCTTTGGCACCATCTTTCAGACTCAACACCAATTCACGCTTTTTCAGGAAAAAGAAAGGAAGCAAAATGTTGGAATCCGAAGACTCAAAAGTTGAAGTCTTCTGGGACCTCTCGAAGGCCAAGTATGACACTGGCCCTGAACCTGTTGAAGGGTTTTACGTGGCGATTCTCGTTGATGCAGAAATAGGCCTCATTCTCGGTGAAGATGTGGCCAAGAAGTTCAAAACAAGAACCCTTTTGGGCAATGTTTCGCTGTTATCACGGCGTGAGCATTGCTCGGGTAACGCCGTTTACGCAACCAAGGCTCAGTTTTGTGACACTGGAACTTGGCATGACATTTTGATCAGATGCAGTGGCGAGAATGAAGGACTCAAAGCTCCTGTTTTGTCTGTTTGCATTGACAAGAAGACGGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTCGTCGATGGGTTGCTTGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGAATGCTGTGTTCATGTTCAGGACCAGGAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAGAAGATTGCACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCCTATAAGAACACATGA 906 0.4492 MNMSDMISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVSSVYKTTLSNQKQLLITVTWCKSHSNQGLNVTFGEENNNPLAPSFRLNTNSRFFRKKKGSKMLESEDSKVEVFWDLSKAKYDTGPEPVEGFYVAILVDAEIGLILGEDVAKKFKTRTLLGNVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGNAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYAYKNT* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1531 301 Pfam Plant protein of unknown function (DUF868) 38 299 IPR008586 -
Gso12g1531 301 PANTHER EXPRESSED PROTEIN 3 300 IPR008586 -
Gso12g1531 301 PANTHER DUF868 FAMILY PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1531 Gso-Chr12 38752161 38753775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1531 3 300 EF-hand Containing Proteins AT5G28150 39.672 3.37e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1531 - - gmx:100798692 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1531 12 38752161 38753775 Gso11g3314 11 48906859 48909809 GST
Gso12g1531 12 38752161 38753775 Gso12g0699 12 6980624 6982124 PCT
Gso12g1531 12 38752161 38753775 Gso11g1419 11 16336613 16338195 PCT
Gso12g0699 12 6980624 6982124 Gso12g1531 12 38752161 38753775 PCT
Gso11g1419 11 16336613 16338195 Gso12g1531 12 38752161 38753775 PCT