Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1419 ATGAGAGACATAGTTTCTTGCTTCAGCGAGAACGCAGTGAACGTGTCTCACTCTTCAATGTCGTGTTCTTCCTATTCAAACAACGCGTGCATCTCTCCCTCCTCCTCCTCCTCCTCCATTGTTGTTCCCTCCACCCAAAACTCAATCTCCAGCGTCTACAAACTAGTCCTCTCCACGCTGAAGCAAATTCTCATCACGGTCACATGGTGTAGGAGCAACTCCAACCAAGGACTCACCATAACCTTCAACGACGGCGATGACCCTCCACCACCACCCTTCAGACTCAACACCAATTCACGTCTCTTCAGAAAGAAAAAAGGCTCCAAAATCCTCGAATCTTCATCTTCTGACTCATCAACCAAGGTAGAAATCTTATGGGATCTCTCAAACGCCAAGTACGAATCAGGACCCGAACCTGTTCAGGGCTTTCACGTTCTGATCATCATCGACTCTGAAATAGGCTTGGTTCTTGGCGACACTGCTGCTGCTGAAGAAACAGTTTCCAAGAGGCAAAATTTCAAAAACAACAAAAACACCCCTTTGGCTAAGGTCTCACTGTTATCACGAAGAGAGCATTGTTCTGGGAACACGCTTTACACCACCAAGGCTCAGTTCTGTGACACTGGCACGTGGCACGATGTTATGATCAGATGCAGTGTGGAGAAGGAGAATGAAGGGTTGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATTGATAAGAAGACTGTGATTCGTGTGAAGAGGTTGCACTGGAATTTTAGGGGGAACCAGACCATTTTTGTTGATGGGTTGCTTGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACCCTTCTTCTTCTGGGTATGCGGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAGAATGCACACAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA 978 0.4622 MRDIVSCFSENAVNVSHSSMSCSSYSNNACISPSSSSSSIVVPSTQNSISSVYKLVLSTLKQILITVTWCRSNSNQGLTITFNDGDDPPPPPFRLNTNSRLFRKKKGSKILESSSSDSSTKVEILWDLSNAKYESGPEPVQGFHVLIIIDSEIGLVLGDTAAAEETVSKRQNFKNNKNTPLAKVSLLSRREHCSGNTLYTTKAQFCDTGTWHDVMIRCSVEKENEGLLFKSPVLCVCIDKKTVIRVKRLHWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSGYAVFMFRTRSGMDSRLWLEEKNAHKDKDRVEFSLLIYACKTS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1419 325 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gso11g1419 325 PANTHER EXPRESSED PROTEIN 1 324 IPR008586 -
Gso11g1419 325 PANTHER DUF868 FAMILY PROTEIN 1 324 - -
Gso11g1419 325 Pfam Plant protein of unknown function (DUF868) 44 323 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1419 Gso-Chr11 16336613 16338195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1419 1 324 EF-hand Containing Proteins AT5G28150 34.756 9.99e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1419 - - gmx:100797969 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1419 11 16336613 16338195 Gso11g1419 11 16336613 16338195 ECH
Gso12g0699 12 6980624 6982124 Gso11g1419 11 16336613 16338195 GST
Gso12g1531 12 38752161 38753775 Gso11g1419 11 16336613 16338195 PCT
Gso11g3314 11 48906859 48909809 Gso11g1419 11 16336613 16338195 PCT
Gso11g1419 11 16336613 16338195 Gso12g1531 12 38752161 38753775 PCT
Gso11g1419 11 16336613 16338195 Gso11g3314 11 48906859 48909809 PCT