Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0699 ATGAGAGACATAGTTTCTTGTTTCAGTGAGAACGCAGTGAACGTTTCTCACTCTTCAATCTCGTGTTCTTCCTATTCACACAACGCGTGCATCTCTCCCTCCTCCATTGTTGTACCCTCCACCCAAAACTCAATCTCCAGCGTCTACAAACTAGTCCTCTCCACGCTGAAGCAAGTTCTCCTCACGGTCACATGGTGTAGGAGCCACTCCAACCAAGGACTCACCATAACCTTCAACGACGAGGACCCTCCACTTTTCAGACTCAACACCAATTCACGCTTCTTCAGAAAGAAAAAAGGCTCCAAAATCCTCGAATCTTCTGACTCATCATCATCCAAGGTAGAAATCTTATGGGATCTCTCAAGCGCCAAGTACGAATCAGGACCCGAACCTGTTCAGGGCTTTCACGTTGTGATCATCATTGACTCAGAAATAGGCTTGGTTCTCGGTGACACTGCTGCTGAAGAAATAGTTTCCAAGAGGCAAAATTTCAAAAGCAAAAACAACAACAACACCCCTTTGGCTAAAGTTTCACTCTTGTCACGAAGAGAGCATTGTTCTGGGAACACGCTTTATACAACTAAGGCTCAGTTCTGTGACACAGGTACGTGGCACGATGTTATGATCAGATGCAGTGTGGAGAATGAGAATGAAGGGTTGTTCAAGTCACCGGTTTTGTGCGTGTGCATTGATAAGAAGACTGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTTAGGGGGAACCAGACCATTTTCGTTGATGGGTTGCTTGTGGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACCCTTCTTCTTCTGGTTATGCGGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTTGAGGAAAAGAATGCACACAAAGATAAAGACAGGGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA 954 0.4497 MRDIVSCFSENAVNVSHSSISCSSYSHNACISPSSIVVPSTQNSISSVYKLVLSTLKQVLLTVTWCRSHSNQGLTITFNDEDPPLFRLNTNSRFFRKKKGSKILESSDSSSSKVEILWDLSSAKYESGPEPVQGFHVVIIIDSEIGLVLGDTAAEEIVSKRQNFKSKNNNNTPLAKVSLLSRREHCSGNTLYTTKAQFCDTGTWHDVMIRCSVENENEGLFKSPVLCVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSGYAVFMFRTRSGMDSRLWFEEKNAHKDKDRVEFSLLIYACKTS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0699 317 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gso12g0699 317 PANTHER EXPRESSED PROTEIN 1 316 IPR008586 -
Gso12g0699 317 Pfam Plant protein of unknown function (DUF868) 40 315 IPR008586 -
Gso12g0699 317 PANTHER DUF868 FAMILY PROTEIN 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0699 Gso-Chr12 6980624 6982124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0699 1 316 EF-hand Containing Proteins AT5G28150 36.364 1.35e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0699 - - gmx:100794621 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0699 12 6980624 6982124 Gso11g1419 11 16336613 16338195 GST
Gso12g1531 12 38752161 38753775 Gso12g0699 12 6980624 6982124 PCT
Gso11g3314 11 48906859 48909809 Gso12g0699 12 6980624 6982124 PCT
Gso12g0699 12 6980624 6982124 Gso12g1531 12 38752161 38753775 PCT
Gso12g0699 12 6980624 6982124 Gso11g3314 11 48906859 48909809 PCT