Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1491 ATGGCATCATCGTCAAGGTTCCTCAAAATGTCTCTGTCTTTTGTGTTGCTCTTCCTCATCTCAATTCCACCTTCTTTCTCCTCTCCAATTCACCCCACAAGCAACGACCTTCGTTTTTCTTCAACAGCAGAAAAACTCATAAGAGGGCTTAACCTGTTCCCGAAAGACCCCATTAACACACTCGAGAATGACCCTCTTTTTGTGTCAGGAAGCATTGTGGAGAAGAGCTTCACTTTCCCTAGTCTTGCTGCTTCTTCAGAATCTTCTGTTGAAGAACTTGGTCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTCTTCTTTGAATCTCGAAGCAGTAAGAATGATCCTGTTGTCATATGGCTGACTGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTATATTTGTAGACCAACCCACTGGGACGGGTTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGTTTTGCTATTGGCAATGGGTTAACCAATCCTGAAATTCAGTACCAGGCATATACAGATTACGCATTAGACAGGGGACTAATTAAAAAGGCTGATTATGACAGCATCAACAAGTTGATCCCACCATGCAAGCAGGCCATAGAAGCTTGCGGCACTGAAGGTGGAGAAACATGCGTATCTTCATTATATGTTTGCAATAAGATATTCAATCGGATCATGACCATCGCTGACGATGTAAATTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGTTATGACTTCTCTGTGATGGAGGATTTCTTAAACAAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGACTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCTATGATGCAAGACTGGATGAGAAATCTGGAAGTTGGTATTCCCACACTCCTTGAGGAAGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAACTGGCTCGGGAATTCAAGGTGGGTTAATGCAATGGAGTGGTCTGGTCAAAAACAATTTGGGGCGTCTGGTACAGTCCCATTTTTAGTTGATGGTGCAGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCTCTTTCCTCAAGGTATACGAGGCTGGTCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTAAGAAGCTGGATGCAAGGGAAACTGACAATGACAAAGAGTGGAGATAATGTCTCTCCTAAATGA 1515 0.4323 MASSSRFLKMSLSFVLLFLISIPPSFSSPIHPTSNDLRFSSTAEKLIRGLNLFPKDPINTLENDPLFVSGSIVEKSFTFPSLAASSESSVEELGHHAGYYRLPRSKAARMFYFFFESRSSKNDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNIIFVDQPTGTGFSYTSDESDIRHDEEGVSNDLYDFLQAFFKEHPQLTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYDSINKLIPPCKQAIEACGTEGGETCVSSLYVCNKIFNRIMTIADDVNYYDIRKKCVGDLCYDFSVMEDFLNKKTVRDALGVGDLDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEEGIKVLVYAGEEDLICNWLGNSRWVNAMEWSGQKQFGASGTVPFLVDGAEAGTLKSHGPLSFLKVYEAGHMVPMDQPKAALEMLRSWMQGKLTMTKSGDNVSPK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1491 504 Pfam Serine carboxypeptidase 93 490 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 PANTHER CARBOXYPEPTIDASE 39 489 - -
Gso12g1491 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Gso12g1491 504 Gene3D alpha/beta hydrolase 75 502 IPR029058 -
Gso12g1491 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 489 IPR001563 GO:0004185|GO:0006508
Gso12g1491 504 SUPERFAMILY alpha/beta-Hydrolases 95 491 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1491 Gso-Chr12 38138183 38141845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1491 K16298 - gmx:100785987 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1491 12 38138183 38141845 Gso11g3350 11 49310400 49313881 GST
Gso11g1466 11 17014561 17018147 Gso12g1491 12 38138183 38141845 PCT