Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3350 ATGGCATCATTGTCAAGGTTCCTCAAAGTTTCTCTGTCTTCTATGTTGCTCTTCCTCATCTCCATTTCACCTTCTTTCTCCTCTCCAACTGATCACCCCACAAGCAATGACCTTCGTTTTTCTTCAACAGCAGAAAAACTCATAAGAGGGCTTAACCTGTTCCCGAAAGACCCCATTAACACACTCAAGAAAAATGACCCTCTTTTTGTGTCAGGAAGCATTGTGGAGAAGAGGTTCACTTTCCCTACTCTTGCTGCTTCTTCAGAATCATCTATAGAAGAACTTGGTCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGAAGCAGTAAGAATGATCCTGTTGTCATATGGCTGACTGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTATATTTGTAGACCAACCCACTGGGACGGGGTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGCGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAATTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACATTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGATTTGCTATTGGTAATGGGTTAACCAATCCTGAAATTCAGTACCAGGCGTATACAGACTACGCATTAGACAGGGGACTAATTAAAAAGGCTGAATATAACAGTATCAACAAGTTGATCCCACCATGCAAGCAGGCCATAGAAGCTTGCGGAACTGAAGGTGGAGAAACATGCGTATCTTCATTATATGTTTGCAATAAGATATTCAATCGGATCATGACCATTGCTGATGATGTTAATTACTATGACATTAGAAAGAAATGTGTGGGAGTTCTGTGTTATGACTTCTCTGTGATGGAGGATTTCTTAAACGAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGACTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCTATGATGCAAGACTGGATGAGAAATCTGGAAGTTGGTATTCCCACACTTCTTGAGGAAGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCAAGCAATGGAGTGGTCTGGTCAAAAACAATTTGGGGCGTCTGGTACAGTCCCATTTTTGGTTGATGGTGCTGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCGCTTTCCTCAAGGTATACGAGGCTGGTCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTAAGAAGCTGGATGCAAGGCAAACTGACAATGACAAAGAGTGGAGATAATGTCTCTCCTAAATGA 1521 0.426 MASLSRFLKVSLSSMLLFLISISPSFSSPTDHPTSNDLRFSSTAEKLIRGLNLFPKDPINTLKKNDPLFVSGSIVEKRFTFPTLAASSESSIEELGHHAGYYRLPRSKAARMFYFFFESRSSKNDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNIIFVDQPTGTGFSYTSDESDIRHDEEGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKAEYNSINKLIPPCKQAIEACGTEGGETCVSSLYVCNKIFNRIMTIADDVNYYDIRKKCVGVLCYDFSVMEDFLNEKTVRDALGVGDLDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEEGIKVLVYAGEEDLICNWLGNSRWVQAMEWSGQKQFGASGTVPFLVDGAEAGTLKSHGPLAFLKVYEAGHMVPMDQPKAALEMLRSWMQGKLTMTKSGDNVSPK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3350 506 Pfam Serine carboxypeptidase 95 492 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 SUPERFAMILY alpha/beta-Hydrolases 97 493 IPR029058 -
Gso11g3350 506 Gene3D alpha/beta hydrolase 77 504 IPR029058 -
Gso11g3350 506 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Gso11g3350 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 491 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Gso11g3350 506 PANTHER CARBOXYPEPTIDASE 40 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3350 Gso-Chr11 49310400 49313881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3350 K16298 - gmx:100797295 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1491 12 38138183 38141845 Gso11g3350 11 49310400 49313881 GST
Gso11g1466 11 17014561 17018147 Gso11g3350 11 49310400 49313881 PCT